prot_E-siliculosus-1a_M_contig77.15820.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig77.15820.1
Unique Name	prot_E-siliculosus-1a_M_contig77.15820.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	364

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig77.15820.1 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 8.920e-223
Identity = 350/375 (93.33%), Postives = 357/375 (95.20%), Query Frame = 0

Query:    1 MLRVLQPRLPTHGRTPLRRPKVIEGCVRQHGHRRLSTTAEPAKPSSPAAEEPGWPLKYKVAGGAILGTIIPYMFSYAMANDPGSRRLVSKLSPGV-----------VQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINEPVSMEIRTGSGETRRLDGLDAQTPFSSVGRLVQGGGWLTDFDVLDEGDTGDGEAQAGQISATWDTSSSGASSASSYQHEGSSPYSATSAN-SSGVAAAVRRDVAACNIRSWWDIAALEQERARQPAPLATVAGSASSXXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRSVDDVEEEVRELRRQQKELRRKHPGRRRFLGLF 363
            MLRVLQPRLPTHGR PLRRPKVIEGC+RQHGHRRLSTTAEPAKPSSPAAEEPGWPLKYKVAGGAILGTIIPY+FSYAMANDPGSRRLVSKLSPG+           VQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINEPVSMEIRTGSGETRRLDGLDAQTPFSSVGRLVQGGGWLTDFDVLDEGDTGDGEAQ+GQI ATWD SSSGASSASSY+HEGSSPYSATSAN SSGVAAAVRRDVAACNIRSWWDIAALEQE+ARQPAPLATVAGSA  XXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRS+DDVEE VRELRRQQKELRRKHPGRRRFLGLF
Sbjct:    1 MLRVLQPRLPTHGRAPLRRPKVIEGCIRQHGHRRLSTTAEPAKPSSPAAEEPGWPLKYKVAGGAILGTIIPYIFSYAMANDPGSRRLVSKLSPGIATTLPGGGRLGVQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINEPVSMEIRTGSGETRRLDGLDAQTPFSSVGRLVQGGGWLTDFDVLDEGDTGDGEAQSGQIPATWDISSSGASSASSYEHEGSSPYSATSANTSSGVAAAVRRDVAACNIRSWWDIAALEQEQARQPAPLATVAGSAXXXXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRSIDDVEEAVRELRRQQKELRRKHPGRRRFLGLF 375

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig77.15820.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig77.15820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LT04_ECTSI	8.920e-223	93.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 304..324
None	No IPR available	COILS	Coil	Coil	coord: 332..352
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..363
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..79
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig77	contig	E-siliculosus-1a_M_contig77:249305..253858 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig77.15820.1	mRNA_E-siliculosus-1a_M_contig77.15820.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig77 249263..254107 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig77.15820.1 ID=prot_E-siliculosus-1a_M_contig77.15820.1|Name=mRNA_E-siliculosus-1a_M_contig77.15820.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=364bp
MLRVLQPRLPTHGRTPLRRPKVIEGCVRQHGHRRLSTTAEPAKPSSPAAE
EPGWPLKYKVAGGAILGTIIPYMFSYAMANDPGSRRLVSKLSPGVVQWFR
QRQKGGHFFDEDPKRLEYLAHVPDWINEPVSMEIRTGSGETRRLDGLDAQ
TPFSSVGRLVQGGGWLTDFDVLDEGDTGDGEAQAGQISATWDTSSSGASS
ASSYQHEGSSPYSATSANSSGVAAAVRRDVAACNIRSWWDIAALEQERAR
QPAPLATVAGSASSSGSSSARAGSAAGGGSAAASSSVGTVGAARGSSAKK
MSNAEQARAMIQHLDEMVEALERDKLTGVRSVDDVEEEVRELRRQQKELR
RKHPGRRRFLGLF*