prot_E-siliculosus-1a_M_contig75.15676.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15676.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15676.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length191
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: D8LF37_ECTSI (S1 motif domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF37_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.050e-132
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0
Query:    1 MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
            MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPK+ARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV
Sbjct:    1 MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKRARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A835YI70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI70_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.770e-76
Identity = 117/189 (61.90%), Postives = 149/189 (78.84%), Query Frame = 0
Query:    2 TEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKS-AAGAIMIPISWQEMQCPTTKEKEPRKCAKP 189
            T++ CPG RLGRASE+ +GPGTY RG +I+AS+VGP L+Q  A E G P + V   + A+  DQVI+VGD VM RVTR+    A VEI+C GETVLRE + GI++KED+RATEVD+ ++ +S RPGDI+RARV SLGD+ QY+L+TA  +LGVRWAKS A+GAIM+P+SWQEMQCP T  +EPRKCA+P
Sbjct:    4 TQLACPGDRLGRASEFTSGPGTYTRGPHIFASLVGPVLQQEGA-EGGLPVITVRGGRNAQ--DQVIEVGDVVMARVTRVRALLASVEILCAGETVLREAYNGIIKKEDVRATEVDRVDMGQSFRPGDIVRARVSSLGDARQYYLTTAAPDLGVRWAKSDASGAIMVPVSWQEMQCPVTGVREPRKCARP 189          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: H6WBA8_VAULI (S1 motif domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA8_VAULI)

HSP 1 Score: 201 bits (512), Expect = 8.080e-63
Identity = 101/189 (53.44%), Postives = 136/189 (71.96%), Query Frame = 0
Query:    1 MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKP 189
            M+  VCPG R+GR  EY +G GTYVRG +IY+S+VG ++++    E+  P L V   K      Q+++VG  VMGRVTR+    A V+I+C G+ VLRE  +GI+RKED+R+TEVDK ++ K  RPGDI+R +VISLG+S  YFLST+  +LGV WA+S AG +++PISW++MQCP TK  E RKCAKP
Sbjct:    1 MSTTVCPGDRIGRCDEYTSGNGTYVRGPHIYSSLVG-RIQKIEVPEN-LPVLTVKGKK--AVVGQILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWKCFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPISWEQMQCPKTKAVEFRKCAKP 185          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A1X2GSF5_9FUNG (S1 motif domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF5_9FUNG)

HSP 1 Score: 190 bits (483), Expect = 1.790e-58
Identity = 103/189 (54.50%), Postives = 129/189 (68.25%), Query Frame = 0
Query:    2 TEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
            T  V PG+RLG A +Y +GPGTY R   +YASVVG  L Q        P + VS+ K+  A   V  VG+T+ G++ R+S  QA V I+ VG+   +E   G++R +D+RATE DK ++ +S RPGDII+A VISLGD+  YFLSTA+NELGV +A S AGA MIPISWQEMQCP TK  E RKCAKPV
Sbjct:    4 TLAVTPGQRLGYAQDYISGPGTYERDGLLYASVVG--LRQITEQTGALPIITVSKEKEQSA---VPDVGNTITGKIIRVSPMQATVAIMVVGQVPCKEDFTGVIRIQDVRATEKDKVKIYQSFRPGDIIKAEVISLGDARSYFLSTAKNELGVIFATSLAGATMIPISWQEMQCPITKAIEFRKCAKPV 187          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A2P6NTR0_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTR0_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 1.830e-58
Identity = 96/185 (51.89%), Postives = 127/185 (68.65%), Query Frame = 0
Query:    4 VVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAK 188
            +VCPG+RLG    + +G GTY+ G Y++ASV+G + E+ A  + GK  L V + K+      +  +   V  RVTR++ R   V I+CVG+ VLREP  G++R++D+RATE+DK E+ K  RPGDI+ A VISLGDS  YFLSTA+NELGV +AKS AGA M+P SW+ M CP TK KE RK AK
Sbjct:    8 LVCPGERLGHTDTFESGEGTYILGNYVHASVIGAR-EETAGKDGGKTLLSVKKEKEPSIVPDIKSI---VTARVTRVNPRFVNVSILCVGDRVLREPFAGMIRQQDVRATEIDKVEIYKCFRPGDIVLAEVISLGDSRSYFLSTAKNELGVIFAKSVAGATMVPTSWESMMCPKTKTKEFRKVAK 188          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A4P9XTZ4_9FUNG (S1 motif domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XTZ4_9FUNG)

HSP 1 Score: 188 bits (478), Expect = 1.090e-57
Identity = 96/187 (51.34%), Postives = 131/187 (70.05%), Query Frame = 0
Query:    4 VVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
            +V PG+RLGR  +YR GPGTYVR + I+AS+VG +   +AA+E   P + V++ ++     QV  +   V G+V R++ R A V I+ VG T  R+  +GI+R +D+RATE DK ++    RPGD++RA+VISLGD+  Y+LSTA+NELGV +A+S AG  MIPISWQEMQC  TK  E RKCAKP+
Sbjct:    6 IVTPGQRLGREHQYRTGPGTYVRNSVIHASIVGTREIHSAAEEGELPTISVTRGREQTTLPQVDSI---VTGKVLRVNPRFATVAIMAVGPTACRDEFQGIIRVQDVRATEKDKVKIYHCFRPGDVVRAQVISLGDARSYYLSTAQNELGVIFARSVAGVPMIPISWQEMQCTKTKTVELRKCAKPM 189          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A397T025_9GLOM (S1 motif domain-containing protein n=7 Tax=Glomeraceae TaxID=36751 RepID=A0A397T025_9GLOM)

HSP 1 Score: 187 bits (475), Expect = 3.020e-57
Identity = 101/186 (54.30%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    4 VVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKP 189
            +V PG+RLG A +Y +GPGTYVRG  +YASVVG K        +  P L VS+ KQ  A  +V  +   + G+V RI+ ++A V I+ VG +  +E  +GI+R++DIRATE DK ++  S RPGDIIRA VISLGD+  Y+LSTA+NELGV +A+S  GA MIPISWQEMQC  TK  E RKCAKP
Sbjct:    6 IVTPGQRLGFAQDYVSGPGTYVRGNLLYASVVGMKRVTKQTTGES-PMLTVSREKQQSAIPEVYSI---ITGKVIRITPKEAVVSIMVVGNSPCKEDFQGIIRQQDIRATERDKVKIYNSFRPGDIIRAEVISLGDARSYYLSTAKNELGVIYAQSIEGAAMIPISWQEMQCTKTKTTEFRKCAKP 187          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A1C7NNI7_9FUNG (Exosome complex component CSL4 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NNI7_9FUNG)

HSP 1 Score: 187 bits (474), Expect = 4.700e-57
Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 0
Query:    3 EVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKP 189
            E V PG+RLG A++Y  G GTY R   +YASVVG +    ++ E G P + VS+ K+  A   V +VG  + G+V R+S  QA + I+ VG+   +E   GI+R +D+RA E DK ++  S RPGDI++A VISLGD+  Y LSTA+NELGV +A S AGA MIPISWQEMQCP TK  E RKCAKP
Sbjct:    6 EAVTPGQRLGYAADYIQGTGTYERDGLLYASVVGQRYIDPSSQEGGLPTMRVSREKEQSA---VPEVGSVITGKVIRVSPHQAVIAIMVVGDMTCKEDFMGIIRTQDVRAAEKDKVKIYNSFRPGDIVKAEVISLGDARSYVLSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKSIELRKCAKP 189          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: A0A163ITM3_ABSGL (S1 motif domain-containing protein n=2 Tax=Absidia TaxID=4828 RepID=A0A163ITM3_ABSGL)

HSP 1 Score: 186 bits (473), Expect = 6.880e-57
Identity = 101/188 (53.72%), Postives = 125/188 (66.49%), Query Frame = 0
Query:    3 EVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
            E V PG+RLG A EY AG GTY R   +YASVVG +      ++D  P + VS+ K+  A   V  VG+ + G++ R++  QA V I+ VG    +E   G +R +D+RA E DK ++  S RPGDII+A VISLGDS  YFLSTA+NELGV +A S AGA MIPISWQEMQCP TK  E RKCAKPV
Sbjct:    8 EAVTPGQRLGYAQEYIAGNGTYERDGLLYASVVGIRHITTPENKDQLPIISVSKEKEQSA---VPDVGNLITGKIIRVNPHQATVAIMVVGNVPCKEDFTGAIRTQDVRAAEKDKVKIYNSFRPGDIIKAEVISLGDSRSYFLSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKTIEYRKCAKPV 192          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Match: I1CTI8_RHIO9 (S1 motif domain-containing protein n=2 Tax=Rhizopus TaxID=4842 RepID=I1CTI8_RHIO9)

HSP 1 Score: 186 bits (471), Expect = 1.260e-56
Identity = 100/189 (52.91%), Postives = 128/189 (67.72%), Query Frame = 0
Query:    2 TEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKPYLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190
            TE V PG+RLG A++Y  GPGTY R   +YASVVG K    + +E   P + VS+ K+  A   V +VG  + G+V R++  QA + I+ VGET  +E   G++R +D+RA E DK ++  S RPGDI++A VISLGD+  Y LSTA+NELGV +A S AG  MIPISWQEMQCP TK  E RKCAKPV
Sbjct:    5 TEAVTPGQRLGYAADYIQGPGTYERDGLLYASVVGHKYIDQSKNEQ-LPTIRVSKEKEQSA---VPEVGSVITGKVIRVAPHQATIAIMVVGETPCKEDFMGVIRTQDVRAAEKDKVKIYNSFRPGDIVKADVISLGDARSYVLSTAKNELGVIFATSVAGVPMIPISWQEMQCPKTKTIELRKCAKPV 189          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF37_ECTSI2.050e-13299.47S1 motif domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YI70_9STRA1.770e-7661.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBA8_VAULI8.080e-6353.44S1 motif domain-containing protein n=1 Tax=Vaucher... [more]
A0A1X2GSF5_9FUNG1.790e-5854.50S1 motif domain-containing protein n=1 Tax=Hesselt... [more]
A0A2P6NTR0_9EUKA1.830e-5851.89Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A4P9XTZ4_9FUNG1.090e-5751.34S1 motif domain-containing protein n=1 Tax=Thamnoc... [more]
A0A397T025_9GLOM3.020e-5754.30S1 motif domain-containing protein n=7 Tax=Glomera... [more]
A0A1C7NNI7_9FUNG4.700e-5752.41Exosome complex component CSL4 n=1 Tax=Choanephora... [more]
A0A163ITM3_ABSGL6.880e-5753.72S1 motif domain-containing protein n=2 Tax=Absidia... [more]
I1CTI8_RHIO91.260e-5652.91S1 motif domain-containing protein n=2 Tax=Rhizopu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 68..148
e-value: 4.9E-4
score: 29.4
IPR019495Exosome complex component CSL4, C-terminalPFAMPF10447EXOSC1coord: 98..137
e-value: 8.5E-10
score: 39.2
NoneNo IPR availableGENE3D2.40.50.100coord: 3..52
e-value: 5.0E-14
score: 53.5
NoneNo IPR availableGENE3D2.40.50.140coord: 60..190
e-value: 4.5E-51
score: 174.1
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 4..39
IPR025721Exosome complex component, N-terminal domainPFAMPF14382ECR1_Ncoord: 4..36
e-value: 2.3E-12
score: 46.5
IPR039771Exosome complex component Csl4PANTHERPTHR126863'-5' EXORIBONUCLEASE CSL4-RELATEDcoord: 3..190
IPR003029S1 domainPROSITEPS50126S1coord: 70..148
score: 9.919
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 66..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:702002..703896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15676.1mRNA_E-siliculosus-1a_M_contig75.15676.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 701525..703976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15676.1 ID=prot_E-siliculosus-1a_M_contig75.15676.1|Name=mRNA_E-siliculosus-1a_M_contig75.15676.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=191bp
MTEVVCPGKRLGRASEYRAGPGTYVRGTYIYASVVGPKLEQAAADEDGKP
YLIVSQPKQARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREP
HRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAEN
ELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR003029S1_domain
IPR039771Csl4
IPR025721Exosome_cplx_N_dom
IPR019495EXOSC1_C
IPR022967S1_dom