prot_E-siliculosus-1a_M_contig75.15641.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15641.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15641.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length68
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: D7G993_ECTSI (Matrin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.410e-41
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI+LIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  142 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.680e-38
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI+LIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  474 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A6V1NE02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE02_HETAK)

HSP 1 Score: 105 bits (261), Expect = 2.040e-27
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI  I+DA+ LYAK+K  LD + W+    EEYED EGNVLNRRTYEDLARQGL+
Sbjct:   78 MRCLGIPNTKHFHDITTIEDAKALYAKLKAGLDGDAWDGAVEEEYEDSEGNVLNRRTYEDLARQGLL 144          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.350e-27
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LIQDA DLYAK+K  L+ E W P+  EE+ED EGNVLN+RTYEDLARQGL+
Sbjct:  476 MRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A7S2V2Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.710e-27
Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LI+DA  L+ KIKD L  E WN +  EEYED EGNVLNRRTYEDLARQGL+
Sbjct:  248 MRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: K3X6A8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6A8_GLOUD)

HSP 1 Score: 110 bits (274), Expect = 1.110e-26
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDI L++DA  LY K+KD +D E WNPE+ EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  458 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAENWNPENEEEFEDSEGNVLNRKTYEDLARQGLL 524          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A6H5JXR9_9PHAE (SF3a60_Prp9_C domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR9_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.420e-26
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
Query:   20 DARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            DARDLYAK KDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:    2 DARDLYAKTKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 49          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A5D6Y8G9_9STRA (C2H2-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8G9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.090e-26
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDI L++DA  LY K+KD +D E WNPE+ EE+ED EGNVLNR+T+EDLARQGL+
Sbjct:  463 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDTENWNPENEEEFEDSEGNVLNRKTFEDLARQGLL 529          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A1W0ABW6_9STRA (Splicing factor 3A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABW6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.400e-26
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI  + DA  LY K+K+ L++E WN  + EE+ED EGNVLN++TY+DL RQGL+
Sbjct:    1 MRCLGIPNTKHFHDITSMSDALALYEKLKEQLERETWNKANEEEFEDSEGNVLNKKTYQDLERQGLL 67          
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI)

HSP 1 Score: 106 bits (264), Expect = 1.090e-25
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLG+PNTKHFHDI LI+DA  LY+KI+DSL KEQ+  +  EE+ED EGNVLNRRTYEDLARQGL+
Sbjct:  332 MRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G993_ECTSI2.410e-4198.51Matrin-type domain-containing protein n=1 Tax=Ecto... [more]
D7FUU5_ECTSI1.680e-3898.51Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NE02_HETAK2.040e-2773.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CE40_9STRA3.350e-2776.12Matrin-type domain-containing protein n=1 Tax=Trib... [more]
A0A7S2V2Q3_9STRA8.710e-2776.12Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3X6A8_GLOUD1.110e-2673.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6H5JXR9_9PHAE1.420e-2697.92SF3a60_Prp9_C domain-containing protein n=2 Tax=Ec... [more]
A0A5D6Y8G9_9STRA4.090e-2671.64C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A1W0ABW6_9STRA6.400e-2664.18Splicing factor 3A n=1 Tax=Thraustotheca clavata T... [more]
A0A812TNG2_SYMMI1.090e-2574.63SF3A3 protein n=1 Tax=Symbiodinium microadriaticum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024598Domain of unknown function DUF3449PFAMPF11931DUF3449coord: 1..66
e-value: 1.5E-21
score: 77.0
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 1..67
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:448249..448836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15641.1mRNA_E-siliculosus-1a_M_contig75.15641.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 441661..450143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15641.1 ID=prot_E-siliculosus-1a_M_contig75.15641.1|Name=mRNA_E-siliculosus-1a_M_contig75.15641.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=68bp
MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEG
NVLNRRTYEDLARQGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031776SF3A3
IPR024598DUF3449