prot_E-siliculosus-1a_M_contig75.15625.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15625.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15625.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length66
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig75.15625.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.040e-9
Identity = 40/71 (56.34%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    3 RDSAGDNVSYVLARTVWNNLQYLAALAIGAKGLEREPMPARGVLSAR---------YEGIPRDVLLAVLRH 64
            RDS GDNVSYVLARTV   LQYLAA  IGA G   +    RG   AR          EGIPRDV+LA+LR+
Sbjct:  155 RDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCR--RGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_E-siliculosus-1a_M_contig75.15625.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 3.570e-7
Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0 
Query:    2 ARDSAGDNVSYVLARTVWNNLQYLAALAIGAKGLEREPMPARGVLSARYEGIPRD 56
            ARDS GDNV YVLARTV +NLQYLAA  IGA G   +    RG+  +RY  + R 
Sbjct:  121 ARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCR--RGMFCSRYGHVLRQ 173
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE1.040e-956.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI3.570e-756.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:271043..271240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15625.1mRNA_E-siliculosus-1a_M_contig75.15625.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 271025..272170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15625.1 ID=prot_E-siliculosus-1a_M_contig75.15625.1|Name=mRNA_E-siliculosus-1a_M_contig75.15625.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=66bp
MARDSAGDNVSYVLARTVWNNLQYLAALAIGAKGLEREPMPARGVLSARY
EGIPRDVLLAVLRHF*
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