prot_E-siliculosus-1a_M_contig744.15584.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig744.15584.1
Unique Nameprot_E-siliculosus-1a_M_contig744.15584.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length56
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig744.15584.1 vs. uniprot
Match: D7FLV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV3_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.630e-16
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 TALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGGGMG 39
            TALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGGGMG
Sbjct:    3 TALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGGGMG 41
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BLAST of mRNA_E-siliculosus-1a_M_contig744.15584.1 vs. uniprot
Match: A0A6H5KRB3_9PHAE (HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRB3_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 7.090e-6
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    1 TALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGG 36
            TALVDA+SVAAL +TAEAMV D PEEEA   PMGGG
Sbjct:  527 TALVDAQSVAALLMTAEAMVADLPEEEAPASPMGGG 562
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig744.15584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLV3_ECTSI1.630e-16100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRB3_9PHAE7.090e-677.78HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig744contigE-siliculosus-1a_M_contig744:4279..4446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig744.15584.1mRNA_E-siliculosus-1a_M_contig744.15584.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig744 4279..4446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig744.15584.1 ID=prot_E-siliculosus-1a_M_contig744.15584.1|Name=mRNA_E-siliculosus-1a_M_contig744.15584.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=56bp
TALVDARSVAALQVTAEAMVRDFPEEEALEPPMGGGGMGGGLGGIGGKPG
MIQSP*
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