prot_E-siliculosus-1a_M_contig72.15344.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15344.1
Unique Nameprot_E-siliculosus-1a_M_contig72.15344.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length203
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig72.15344.1 vs. uniprot
Match: D8LGJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ0_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 6.410e-50
Identity = 90/110 (81.82%), Postives = 94/110 (85.45%), Query Frame = 0 
Query:   27 DGLGGWVMPEVGPDGEAKFKMVGPTGNCYGYSIARSGAYRFGLHPRSEGRRPPFKHVAHKRGRDADASDEAPAAKRRRCPKLSEEEVIAILSQRLAELEKAEHEAARAKE 136
            DG+GGWVMPE GPDGEAKFKM GPTGNCY YS ARSGAYRFGLHPRSEG        A+KRGRDADASDEAPAAKR  CPKLSEE++IAI  QRLAELEKAEHEAARAKE
Sbjct:    3 DGVGGWVMPEAGPDGEAKFKMTGPTGNCYDYSKARSGAYRFGLHPRSEGGE------AYKRGRDADASDEAPAAKR--CPKLSEEDIIAIFPQRLAELEKAEHEAARAKE 104
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGJ0_ECTSI6.410e-5081.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..144
IPR000104Antifreeze protein, type IPRINTSPR00308ANTIFREEZEIcoord: 166..175
score: 78.75
coord: 153..164
score: 66.67
coord: 139..153
score: 53.33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:6722..12472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15344.1mRNA_E-siliculosus-1a_M_contig72.15344.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig72 6722..12472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig72.15344.1 ID=prot_E-siliculosus-1a_M_contig72.15344.1|Name=mRNA_E-siliculosus-1a_M_contig72.15344.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=203bp
MRGSDGKGASPVPPSDDGHQQRQVSADGLGGWVMPEVGPDGEAKFKMVGP
TGNCYGYSIARSGAYRFGLHPRSEGRRPPFKHVAHKRGRDADASDEAPAA
KRRRCPKLSEEEVIAILSQRLAELEKAEHEAARAKEAAAAAAAARAAAAA
QAAAAAAAAVTAAAADAAAAAVATAKVVAVTAAASAAKTAALQAAEALAG
KEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000104Antifreeze_1