prot_E-siliculosus-1a_M_contig7.15149.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15149.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15149.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length301
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 532 bits (1370), Expect = 3.280e-189
Identity = 272/298 (91.28%), Postives = 279/298 (93.62%), Query Frame = 0
Query:    6 TAQHLLRDMVAPPIKTAVAVFTLFWGNTLAWQAPTSTRSSTNSLVSRASF---DTCGSAAPFMRRRCATTQQNRAMKAATTSGIGVSMGGDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVRDVVRSIQEE 300
            TAQHLLRDMVAPP+KTAVAVFTLF G +LAWQAPTS RSSTNSLVSRAS        SAAPFMRRRCATTQQN A+KAATTSG G+SM GDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPF+GRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLP+ETRGITRARGQWADPVALAEIH GRL D LIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLR VRDVVR IQ+E
Sbjct:   45 TAQHLLRDMVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSCCRTRSRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQQE 342          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.850e-63
Identity = 107/195 (54.87%), Postives = 133/195 (68.21%), Query Frame = 0
Query:   97 HRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            H      LL LTGDPLE  GGR+VV+RGDP A LM++GEAPGA ED  G PF+GRSGQLLD +L+A GFDPE ++YVSNIVRRRP +NR PT  E+ +Y P+LLEEI LV+P +I+  G  S +A+L +E RGIT+ RGQW  P    ++          MPWFHPSYLLRN    ++ EGG +W    D + VR
Sbjct:   60 HAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVL-NERRGITKVRGQWYAPGTTPDLPAATWA----MPWFHPSYLLRNP---TKDEGGPKWLTWVDAQEVR 246          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 206 bits (525), Expect = 1.000e-62
Identity = 107/195 (54.87%), Postives = 135/195 (69.23%), Query Frame = 0
Query:   97 HRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            H+A VE L  LTGDPLE  GG +V++RG+P+A LM+IGE PGAEEDRL  PF+GRSGQLLD +LRAV FDPE +VY++N+V+RRP +NR PTPEE++FY P+L EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +         GR     IMP FHP+YLLRN          + W   +D+RAVR
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILG-EKRGITKVRGQWFE-------RGGRW----IMPMFHPAYLLRNPQRTPGSPKALTW---DDIRAVR 209          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 203 bits (516), Expect = 1.200e-61
Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 0
Query:   97 HRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            H+  VE L  L GDPLE+ GG +V++RG+P+A LM+IGE PGA EDRL  PF+GRSG+LLD +L AV F+PE++VY+SN+VRRRP  NR P P+E+ FY P+L EEI L+DP +I+L+G  +   +L  E RGIT+ RGQW          DGR     IMP FHP+YLLRN G+R      + W   +D+RAVR
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILK-EKRGITKVRGQWFQK-------DGRW----IMPMFHPAYLLRNPGKRPGSPKSLTW---DDIRAVR 190          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 190 bits (482), Expect = 2.000e-56
Identity = 97/195 (49.74%), Postives = 129/195 (66.15%), Query Frame = 0
Query:   97 HRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            H+A VE L  LT DPLE  G  +V++RG P A LM+IGEAPGAEED++G PF+GRSGQLLD +L+AV F+ E ++Y++N ++RRP +NR P  EE+++Y PFL EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +         GR     +MP FHP+YLLRN  +       + W    D+RAVR
Sbjct:   15 HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTIL-QEKRGITKVRGQWVE-------QGGRW----VMPIFHPAYLLRNPRKTPGSPKALMWE---DIRAVR 194          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: W7TG57_9STRA (Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG57_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.580e-55
Identity = 100/196 (51.02%), Postives = 133/196 (67.86%), Query Frame = 0
Query:   96 GHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            GH  FV+ L  L GDPL+ +G RVV+ RG+  A +M+IGEAPG  ED  G PF+GR+G+LLD +L +VG D E  VY++N+V RRP +NRTP+  E+ +YLP+L+E + LVDP +I+L GA + KALLP E +GITR RGQW +     E        +L+MP FHPSYLLRN    SR+  G +W    D++AVR
Sbjct:   82 GHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNP---SRKVEGPKWLTWQDIQAVR 273          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 187 bits (475), Expect = 2.640e-55
Identity = 97/197 (49.24%), Postives = 125/197 (63.45%), Query Frame = 0
Query:   95 EGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVR 291
            E H A +  +  LT DPL   G R+V++RG+P A L+++GE PGA EDRLG P++GRSGQLLD +L A GFD +  VYV+N V RRP DNR PT  E+DFYLP+LLE I +VDP VI+L G  S + +L  E RGIT+ RG W            +  D+ IMP FHP+YLLRN      +   + W    D++AVR
Sbjct:   13 ETHAAIIRAMEALTDDPLYPTGNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYVTNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTGRFSMRQILG-EKRGITKVRGTWY-----------QRHDRWIMPMFHPAYLLRNPSRAVGKPKSLTWQ---DIQAVR 194          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: C1FF23_MICCC (Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF23_MICCC)

HSP 1 Score: 187 bits (476), Expect = 5.790e-55
Identity = 94/191 (49.21%), Postives = 128/191 (67.02%), Query Frame = 0
Query:  104 LLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVRDVV 294
            L +LTGDPLE DGGR+V FRGD +A +M+IGEAPGAEED+LGVPF+GR+G+LLD++  +V    +R  YV+N+V+RRP++NR PT  E+++Y  +L EEI L+DP +IV  G  S + LL     GIT+ RG+W D        DGR+    +MP FHPSYLLRN  +       + W   +D+R V+  V
Sbjct:   62 LRSLTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLSTDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKNCEGITKIRGRWFDV-------DGRV----VMPMFHPSYLLRNPQKTPGSPKALTW---DDIREVKRKV 238          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.310e-54
Identity = 99/190 (52.11%), Postives = 126/190 (66.32%), Query Frame = 0
Query:  100 FVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFD--PEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDL 287
            F +   ++ GDPL+  GG VVVFRG+P   +M++GEAPG EED+  +PF+G++GQLL+ ML   GFD  P+ EVY++N+V+RRP +NR PTPEE+ FYLP L EEI LVDP +IV  G+ S KALL  E RGIT+ RG W D              K  MP FHPSYLLRN   RS+++   RW   NDL
Sbjct:   64 FFQVTQSMEGDPLD-GGGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAGSFSMKALL-EEDRGITKVRGTWYD-----------YKGKKCMPIFHPSYLLRN---RSKEKNQPRWLTWNDL 237          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.600e-53
Identity = 96/202 (47.52%), Postives = 131/202 (64.85%), Query Frame = 0
Query:   91 GGDAEGHRAFVEKLLT----LTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLR 288
            GG+ E   +  E+L +    L+GDPLEE GGRVV +RG+P A ++++GEAPGA ED LGVP++GR+G+LLD +L A GFD E +VY +N+V+RRP +NR PT  E+ +Y P LLEE+ LVDP ++V  G  S + LL  + +GIT+ RGQW     L EIH         MP FHPSYLLRN   ++     + W    ++R
Sbjct:   18 GGEEEVQFSSFEELASALAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDVK-QGITKVRGQWFPLPGLPEIHG--------MPMFHPSYLLRNPSRKAGSPKSLTWVDAQEIR 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN93_ECTSI3.280e-18991.28Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s... [more]
A0A835YMS9_9STRA1.850e-6354.87Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A3M1EZS2_9CHLR1.000e-6254.87Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7C3BN30_9CHLR1.200e-6152.82Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A1W9W486_9CHLR2.000e-5649.74Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
W7TG57_9STRA1.580e-5551.02Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidac... [more]
A0A7C3CIK3_9CHLR2.640e-5549.24Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]
C1FF23_MICCC5.790e-5549.21Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas c... [more]
A0A7S2V4W6_9STRA6.310e-5452.11Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j... [more]
A0A7S2S1J0_9STRA1.600e-5347.52Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 121..288
e-value: 2.4E-31
score: 120.1
NoneNo IPR availablePANTHERPTHR33693FAMILY NOT NAMEDcoord: 99..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..300
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 121..288
e-value: 2.4E-31
score: 120.1
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 123..273
e-value: 3.9E-35
score: 121.1
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 93..296
e-value: 2.2E-50
score: 172.7
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 99..294
IPR005273Uracil-DNA glycosylase family 4TIGRFAMTIGR00758TIGR00758coord: 112..275
e-value: 1.1E-40
score: 137.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1654971..1659284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15149.1mRNA_E-siliculosus-1a_M_contig7.15149.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1654852..1660516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15149.1 ID=prot_E-siliculosus-1a_M_contig7.15149.1|Name=mRNA_E-siliculosus-1a_M_contig7.15149.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=301bp
MALRHTAQHLLRDMVAPPIKTAVAVFTLFWGNTLAWQAPTSTRSSTNSLV
SRASFDTCGSAAPFMRRRCATTQQNRAMKAATTSGIGVSMGGDAEGHRAF
VEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFIG
RSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLL
EEIGLVDPHVIVLLGASSTKALLPHETRGITRARGQWADPVALAEIHDGR
LTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLRAVRDVVRSIQEE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005273Ura-DNA_glyco_family4
IPR036895Uracil-DNA_glycosylase-like_sf
IPR005122Uracil-DNA_glycosylase-like