prot_E-siliculosus-1a_M_contig7.15089.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15089.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15089.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length210
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15089.1 vs. uniprot
Match: D7FPB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB4_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 3.630e-127
Identity = 196/206 (95.15%), Postives = 197/206 (95.63%), Query Frame = 0
Query:    1 MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGFLNAGIISTLGVLTLFMAFWPPLLADLAVASGSVITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTLFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAPSMSRASSTRPSQIATMTSRSEYSASKISRL 206
            MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVG LNAGIISTLGV TLFM FWPPLL DLAVASGS ITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLT FGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAPSMSRASSTRPS IATMTS SEYSA+KISR 
Sbjct:    1 MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGLLNAGIISTLGVGTLFMTFWPPLLVDLAVASGSAITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTQFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAPSMSRASSTRPSLIATMTSSSEYSATKISRF 206          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15089.1 vs. uniprot
Match: D7FVJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ6_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 4.590e-42
Identity = 87/193 (45.08%), Postives = 122/193 (63.21%), Query Frame = 0
Query:    2 LFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGFLNAGIISTLGVLTLFMAFWPPLLADLAVASGSVITCIVIIFVAVRITSFINCAMSEH-----AASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTLFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAAPSMSRASSTRPSQI 189
            +F VAM+AE+W+ESLP Q+++P SFA  L   S   ++F+V+G  N G++S LGV+T F   WP   ADL +  G +   +V+ FVA RIT+ IN A S       + SS  FY +AK+N+W QA ALC +GC   + IA++ LT+ GRSTPII+ T Q L GH  A++F+S T F  A  M R S+   S++
Sbjct:   48 MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARSWPQQAADLFIVGGVLTAELVVFFVASRITAVINQATSTAMGRPGSPSSRAFYFKAKRNMWIQAAALCGVGCFPMLVIAIKRLTMAGRSTPIIIETLQILTGHGGAIMFSSATSFDRASGMRRNSAVDTSRV 240          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15089.1 vs. uniprot
Match: A0A6H5KVX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX1_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.630e-27
Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    2 LFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGFLNAGIISTLGVLTLFMAFWPPLLADLAVASGSVITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTLFGRSTPIIVWTAQ 155
            +F VAM+AE+W+ESLP Q+++P SFA  L   S   ++F+V+G  N G++S LGV+T F   WP   AD+ V  G                      ++  + SS  FY +AK+NLW QA AL  +GC   + IA++ LT+ GRSTPII+ T Q
Sbjct:   32 MFEVAMIAEYWVESLPSQILTPDSFAGKLRNASETSSLFVVIGVANGGLVSLLGVMTFFARTWPQQAADIFVVGG---------------------ILTAGSPSSRTFYSKAKRNLWIQAAALSGVGCFPMLVIAIKLLTMAGRSTPIILETLQ 164          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15089.1 vs. uniprot
Match: A0A6H5JMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.680e-11
Identity = 57/139 (41.01%), Postives = 62/139 (44.60%), Query Frame = 0
Query:   61 MAFWPPLLADLAVASGSVITCIVIIFVAVRITSFINCAMSEHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTLFGRSTPIIVWTAQTLCGHAAALIFTSLTQFQAA-PSMSRASSTRPSQIATMTSRSEY 198
            MAFWPPLLADL V SGS I   VI FVAVRITSFIN AMSE                                                       LCGHAAA +F S TQF AA PSMS   +   + I TM SRS++
Sbjct:    1 MAFWPPLLADLVVVSGSCIAGTVIFFVAVRITSFINRAMSE------------------------------------------------------ALCGHAAAFLFMSSTQFHAAAPSMSSTGTNHSTLITTMRSRSKH 85          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPB4_ECTSI3.630e-12795.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVJ6_ECTSI4.590e-4245.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX1_9PHAE1.630e-2740.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMK0_9PHAE3.680e-1141.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..209
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1071262..1073590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15089.1mRNA_E-siliculosus-1a_M_contig7.15089.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1071262..1073590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15089.1 ID=prot_E-siliculosus-1a_M_contig7.15089.1|Name=mRNA_E-siliculosus-1a_M_contig7.15089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=210bp
MLFGVAMMAEFWLESLPHQLVSPGSFAEWLTKVSRKHNIFLVVGFLNAGI
ISTLGVLTLFMAFWPPLLADLAVASGSVITCIVIIFVAVRITSFINCAMS
EHAASSNEFYIEAKKNLWKQALALCSIGCAVSVAIAVRHLTLFGRSTPII
VWTAQTLCGHAAALIFTSLTQFQAAPSMSRASSTRPSQIATMTSRSEYSA
SKISRLDEG*
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