Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Start | 1 |
Stop | 1 |
Cds size | 375 |
Model size | 746 |
Exons | 1 |
Hectar predicted targeting category | signal peptide |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622936471.677575-UTR-E-siliculosus-1a_M_contig93:442487..442645 | 1622936471.677575-UTR-E-siliculosus-1a_M_contig93:442487..442645 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 442488..442645 + |
1696251094.0738304-UTR-E-siliculosus-1a_M_contig93:442487..442645 | 1696251094.0738304-UTR-E-siliculosus-1a_M_contig93:442487..442645 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 442488..442645 + |
1622936471.7130737-UTR-E-siliculosus-1a_M_contig93:443020..443233 | 1622936471.7130737-UTR-E-siliculosus-1a_M_contig93:443020..443233 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 443021..443233 + |
1696251094.0973222-UTR-E-siliculosus-1a_M_contig93:443020..443233 | 1696251094.0973222-UTR-E-siliculosus-1a_M_contig93:443020..443233 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 443021..443233 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622936471.6956663-CDS-E-siliculosus-1a_M_contig93:442645..443020 | 1622936471.6956663-CDS-E-siliculosus-1a_M_contig93:442645..443020 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 442646..443020 + |
1696251094.0853155-CDS-E-siliculosus-1a_M_contig93:442645..443020 | 1696251094.0853155-CDS-E-siliculosus-1a_M_contig93:442645..443020 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 442646..443020 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17364.1 >prot_E-siliculosus-1a_M_contig93.17364.1 ID=prot_E-siliculosus-1a_M_contig93.17364.1|Name=mRNA_E-siliculosus-1a_M_contig93.17364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=125bp
MGGVRVLSLVGGVTLVCGLTHELTVYALRAHGEEARPRNNVAQHGERGST QRATCPIPISNDSEGDMRQNSRAQGIHPDQRLTTKRSQRDTFVVTGCSGG AMKGAPPVPFSCLCCSKNTHAQPS* back to topmRNA from alignment at E-siliculosus-1a_M_contig93:442488..443233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig93.17364.1 ID=mRNA_E-siliculosus-1a_M_contig93.17364.1|Name=mRNA_E-siliculosus-1a_M_contig93.17364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=746bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:442488..443233+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) CCGCTGTGACCGACTCATGGAAAGAGGTGTTACTGAAAGTCTCTGCCGGA
CAAACTAGTTCGTGTGGTTGTCTTTGTTTATAGCATTCTCCGCGCTAGGC
GGCTGGCCCAAAGACAGAGTTGCTGAATTAGGAAAAAATGTGATCAACGC
TCCCCCAGATGGGCGGCGTGCGTGTACTGTCTTTGGTGGGGGGAGTCACA
CTCGTATGTGGGCTGACCCATGAATTGACGGTGTACGCTCTGCGTGCACA
TGGAGAAGAAGCACGGCCTAGAAATAATGTGGCTCAACACGGCGAGAGGG
GGTCGACACAACGTGCAACATGTCCAATTCCAATCTCCAACGATAGTGAG
GGCGACATGCGGCAGAACTCTCGGGCACAGGGCATACACCCCGACCAACG
GTTAACAACAAAACGTAGCCAAAGAGACACATTTGTCGTGACGGGGTGCT
CCGGAGGGGCGATGAAAGGAGCCCCCCCCGTCCCTTTTTCCTGTCTTTGT
TGCAGTAAAAACACACATGCCCAACCTTCGTGAGCGCGCCTACCGCCCAC
CTCTACGGACAACCACGAACTGAGAATAATAGACTTCAAACACGTCCACG
CACTGCTCTCAGTACGCTCGATAATGTATCACCCATCCCATCCCAACTGA
CTGCAGTAGAGATCTCCCCTTGTTCGATGCTCACCGCACACACAAGTTGC
CCACCGTGTACATAAAACACGTTCGGGTGGCAGGAGTGGTTGAACG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:442488..443233+ >mRNA_E-siliculosus-1a_M_contig93.17364.1 ID=mRNA_E-siliculosus-1a_M_contig93.17364.1|Name=mRNA_E-siliculosus-1a_M_contig93.17364.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=750bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:442488..443233+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGGGCGGCGTGCGTGTACTGTCTTTGGTGGGGGGAGTCACACTCGTATG TGGGCTGACCCATGAATTGACGGTGTACGCTCTGCGTGCACATGGAGAAG AAGCACGGCCTAGAAATAATGTGGCTCAACACGGCGAGAGGGGGTCGACA CAACGTGCAACATGTCCAATTCCAATCTCCAACGATAGTGAGGGCGACAT GCGGCAGAACTCTCGGGCACAGGGCATACACCCCGACCAACGGTTAACAA CAAAACGTAGCCAAAGAGACACATTTGTCGTGACGGGGTGCTCCGGAGGG GCGATGAAAGGAGCCCCCCCCGTCCCTTTTTCCTGTCTTTGTTGCAGTAA AAACACACATGCCCAACCTTCGTGAATGGGCGGCGTGCGTGTACTGTCTT TGGTGGGGGGAGTCACACTCGTATGTGGGCTGACCCATGAATTGACGGTG TACGCTCTGCGTGCACATGGAGAAGAAGCACGGCCTAGAAATAATGTGGC TCAACACGGCGAGAGGGGGTCGACACAACGTGCAACATGTCCAATTCCAA TCTCCAACGATAGTGAGGGCGACATGCGGCAGAACTCTCGGGCACAGGGC ATACACCCCGACCAACGGTTAACAACAAAACGTAGCCAAAGAGACACATT TGTCGTGACGGGGTGCTCCGGAGGGGCGATGAAAGGAGCCCCCCCCGTCC CTTTTTCCTGTCTTTGTTGCAGTAAAAACACACATGCCCAACCTTCGTGA back to top
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