prot_E-siliculosus-1a_F_contig169.3863.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig169.3863.1
Unique Nameprot_E-siliculosus-1a_F_contig169.3863.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length538
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig169.3863.1 vs. uniprot
Match: D8LDF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF1_ECTSI)

HSP 1 Score: 1066 bits (2758), Expect = 0.000e+0
Identity = 526/537 (97.95%), Postives = 530/537 (98.70%), Query Frame = 0 
Query:    1 MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNFRTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSGIARDMALPSRKVPGPGHYSWHEKDRPSQPGGKFGQAPQRPQTREDLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPPTDEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSFQIKPPTSVKPHASRERKLQELDPESLRRAFKSTRKGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGVKFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPPPNRSSRGTTPVVTPGPSDYNPTFSNMAQTTHALSFGGATPNSKGGGARGMPRRSSSPGPGAYSMGSGLGVQTSSKYPSSTGPSFRAR 537
            MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNFRTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSG+ARDMALPSRKVPGPGHYSWHEKDRPSQPGGKFGQAPQRPQTR DLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPP DEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSFQIKPPTSVKP+ SRERK+QELDPESLRRA KSTRKGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGVKFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPPPNRSSR  TPVVTPGPSDYNPT SNMAQTTHALSFGGATPNSKGGGARGMPRRSSSPGPGAYS+GSGLGVQTSSKYPSSTGPSFRAR
Sbjct:    1 MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNFRTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSGVARDMALPSRKVPGPGHYSWHEKDRPSQPGGKFGQAPQRPQTRGDLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPPIDEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSFQIKPPTSVKPNVSRERKMQELDPESLRRAIKSTRKGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGVKFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPPPNRSSRRNTPVVTPGPSDYNPTSSNMAQTTHALSFGGATPNSKGGGARGMPRRSSSPGPGAYSIGSGLGVQTSSKYPSSTGPSFRAR 537
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BLAST of mRNA_E-siliculosus-1a_F_contig169.3863.1 vs. uniprot
Match: A0A485KFJ8_9STRA (Aste57867_3477 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFJ8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.620e-6
Identity = 63/237 (26.58%), Postives = 90/237 (37.97%), Query Frame = 0 
Query:   85 YELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGS---GIARDMALPSRKVPGPGHYSWH--EKDRPSQPGGKFGQAPQRPQTREDLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPPTDEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSF 316
            +E  K +CG+QV SR +TAPTP+FG+S RP   G+G                                    KSPGPG Y V  ++     ST  +       G    G   D+   +   PGPG Y+ H    + P  P    G+   +    +   P PG Y  P  L  T      +  A     P    +    S+   +G    PG Y+ G V   AV K+ +ST  +  ++
Sbjct:   38 FEDIKSSCGEQVDSRKRTAPTPIFGTSSRPKDPGDGS-----------------------------------KSPGPGAYQVPSAISRPVLSTMVTAPACSIAGREKFGSTSDLKSAAN-CPGPGDYTPHIVNPNEPIAPQFSLGKKWSKSLDGQSKVPGPGAYDTPENLLNTKTVLSTSKHATASSFPKVNRKPLMESSTADVG----PGQYNTGNV---AVGKQVVSTVTNAAAY 231
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BLAST of mRNA_E-siliculosus-1a_F_contig169.3863.1 vs. uniprot
Match: T0QAC9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QAC9_SAPDV)

HSP 1 Score: 58.2 bits (139), Expect = 1.180e-5
Identity = 59/190 (31.05%), Postives = 75/190 (39.47%), Query Frame = 0 
Query:   85 YELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGS---GIARDMALPSRKVPGPGHYSWH-----EKDRPSQPGGKFGQAPQRPQTREDLRPAPGQYSIPSTLGT-TMDSRFRTVVAPGF 265
            Y+  K +CG+QV SR +TAPT  FGSS R    G+G                                +   KSPGPG Y V  SLG+   ST  +       G    G   D+ L +   PGPG YS       E + P    GK    P  P  +    P PG Y  P ++ T  + S  R+  AP F
Sbjct:   33 YDDIKSSCGEQVDSRKRTAPTTCFGSSSR----GQG--------------------------------SDGSKSPGPGAYQVPTSLGKPVLSTMRTAPACSVAGREKFGSVSDLKLAA-SCPGPGDYSSQVVNLKEANAPHYSLGKKWTTPAEPTKKS---PGPGAYDTPESISTKAVRSTNRSAPAPSF 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig169.3863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDF1_ECTSI0.000e+097.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485KFJ8_9STRA1.620e-626.58Aste57867_3477 protein n=1 Tax=Aphanomyces stellat... [more]
T0QAC9_SAPDV1.180e-531.05Uncharacterized protein n=2 Tax=Saprolegniaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 286..296
e-value: 1.4
score: 10.0
coord: 375..404
e-value: 0.53
score: 11.3
coord: 463..492
e-value: 0.47
score: 11.5
NoneNo IPR availablePANTHERPTHR21580:SF28SPERM-TAIL PG-RICH REPEAT-CONTAINING PROTEIN 2coord: 287..529
coord: 67..383
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 287..529
coord: 67..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig169contigE-siliculosus-1a_F_contig169:16509..27422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig169.3863.1mRNA_E-siliculosus-1a_F_contig169.3863.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig169 16509..27422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig169.3863.1 ID=prot_E-siliculosus-1a_F_contig169.3863.1|Name=mRNA_E-siliculosus-1a_F_contig169.3863.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=538bp
MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNF
RTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRF
KTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWR
KKTKAPKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSGIARDMALPSR
KVPGPGHYSWHEKDRPSQPGGKFGQAPQRPQTREDLRPAPGQYSIPSTLG
TTMDSRFRTVVAPGFGTPPPTDEQRPHSAAGRLGGGPGPGAYDVGRVDSL
AVQKKPLSTEKSCLSFQIKPPTSVKPHASRERKLQELDPESLRRAFKSTR
KGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGV
KFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPP
PNRSSRGTTPVVTPGPSDYNPTFSNMAQTTHALSFGGATPNSKGGGARGM
PRRSSSPGPGAYSMGSGLGVQTSSKYPSSTGPSFRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt