prot_E-siliculosus-1a_F_contig1685.3838.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1685.3838.1
Unique Nameprot_E-siliculosus-1a_F_contig1685.3838.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length161
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: D8LBL7_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL7_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 7.200e-107
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANGNQGPSRRR 160
            MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARA KMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMD+LMEEAKEEAANGNQGPSRRR
Sbjct:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQGPSRRR 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A7S4A8C4_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8C4_9STRA)

HSP 1 Score: 266 bits (679), Expect = 3.490e-89
Identity = 131/160 (81.88%), Postives = 149/160 (93.12%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE-AANGNQGPSRR 159
            MINFLLL+SRQGKTRLTKWY++Y+AKEKAR VREITSTVLARAPKMCNFVEWR+KKI+YKRYASLFF+ C+D +DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+F+GGEL ESSKKEVL VC+QMDELMEE +E+ AA+G+ G  R+
Sbjct:    1 MINFLLLVSRQGKTRLTKWYESYAAKEKARIVREITSTVLARAPKMCNFVEWRNKKIIYKRYASLFFIVCVDAEDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDEIFVGGELCESSKKEVLSVCAQMDELMEEREEDKAASGSSGRVRK 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A835Z7C9_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C9_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.210e-88
Identity = 125/151 (82.78%), Postives = 144/151 (95.36%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAAN 151
            M+NFLLL+SRQGKTRLTKWY+ Y++KEKAR VREIT+ VLAR PKMCNF+EWRDKKIVYKRYASLFFVAC+D+DDNELITLE+IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVC Q+D+LME+ +++ ++
Sbjct:    1 MLNFLLLVSRQGKTRLTKWYEAYTSKEKARIVREITTLVLARPPKMCNFLEWRDKKIVYKRYASLFFVACVDRDDNELITLEQIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCGQIDDLMEDVRDDGSS 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A7S2SD76_9STRA (AP complex subunit sigma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD76_9STRA)

HSP 1 Score: 258 bits (659), Expect = 6.260e-86
Identity = 123/153 (80.39%), Postives = 143/153 (93.46%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTY-SAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANG 152
            MINF+LLISRQGKTRLTKWY++Y S KEKAR VREIT+ VL+R PK+CNF+EWRDKK++YKRYASLFFVAC+D++DNEL+TLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFI GELQESSKKEVL VC+QMDE+M+E+K+E  +G
Sbjct:   14 MINFMLLISRQGKTRLTKWYESYGSTKEKARIVREITAMVLSRPPKLCNFIEWRDKKVIYKRYASLFFVACVDKEDNELVTLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFINGELQESSKKEVLSVCAQMDEMMDESKDEGTSG 166          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: W7T3W8_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3W8_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.150e-85
Identity = 122/148 (82.43%), Postives = 137/148 (92.57%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MINFLLL+SRQGKTRL+KWY+ Y+ KEKAR +RE+T+ VLARAPKMCNF+EWRDKK++YKRYASLFF+A +D  DNELITLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFIGG LQESSK EVLRVCSQMDELMEE K++
Sbjct:    1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A7S2XUT6_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUT6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.790e-85
Identity = 123/151 (81.46%), Postives = 136/151 (90.07%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAAN 151
            MINF+LLISRQGKTRLTKWY +Y  KEKAR +REITS VL R PKMCNF+EW+DKKIVYKRYASLFFV CID+ DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFI GELQES K+EVLR+C QMD++MEE KE+ +N
Sbjct:    1 MINFMLLISRQGKTRLTKWYDSYGTKEKARIMREITSMVLNRPPKMCNFIEWKDKKIVYKRYASLFFVVCIDKGDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELQESGKREVLRICGQMDDMMEEGKEDVSN 151          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A7S3LZF2_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZF2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 6.760e-82
Identity = 116/148 (78.38%), Postives = 138/148 (93.24%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MINF+LL+SRQGKTRL+KW+   +AKEK R VRE+T+TVL+R PKMCNF+EW+DKK++YKRYASLFFVAC+D++DNELI LE+IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGG LQE+SK EVLR+C+ MDE+M+E+KEE
Sbjct:   18 MINFILLVSRQGKTRLSKWFVQMTAKEKTRAVRELTATVLSRPPKMCNFIEWQDKKVIYKRYASLFFVACVDKNDNELIVLEQIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQETSKVEVLRICAAMDEMMDESKEE 165          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A812YG65_SYMMI (AP complex subunit sigma (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YG65_SYMMI)

HSP 1 Score: 241 bits (616), Expect = 1.640e-79
Identity = 112/147 (76.19%), Postives = 135/147 (91.84%), Query Frame = 0
Query:    2 INFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            INF+LL+SRQGKTRLTKW+     K+K R+VRE+T  VL+R PK+CNF+EWRDKK+VYKRYASL+F+AC+D++DNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYI+DELFIGG LQE+SK EVLR+C+ MDE+M+E+K+E
Sbjct:    1 INFILLVSRQGKTRLTKWFVQKEPKDKTRSVRELTGMVLSRPPKLCNFLEWRDKKVVYKRYASLYFIACVDKEDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYIMDELFIGGYLQETSKAEVLRICAAMDEMMDESKDE 147          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: F0Y8T1_AURAN (AP complex subunit sigma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8T1_AURAN)

HSP 1 Score: 241 bits (615), Expect = 3.250e-79
Identity = 127/176 (72.16%), Postives = 142/176 (80.68%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWR-DKKIVYKRYASLFFVAC--------------------IDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANGNQG 155
            MINF+LL+SRQGKTRLTKWY++YS KEKAR VRE  +TVLARAPKMCNF+EWR DKKIVYKRYASLFF+ C                    +D +DNELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFI GEL+ESSKKEVL +C+QMDE+M+E+KEE  NG  G
Sbjct:    1 MINFMLLVSRQGKTRLTKWYESYSTKEKARIVRE--ATVLARAPKMCNFIEWRADKKIVYKRYASLFFICCGDRRRERAPRRRKLKFLPAGVDSEDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELEESSKKEVLSICAQMDEMMDESKEEG-NGKGG 173          
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Match: A0A024THD2_9STRA (AP complex subunit sigma n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024THD2_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.130e-76
Identity = 110/148 (74.32%), Postives = 130/148 (87.84%), Query Frame = 0
Query:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MI+F+LL+SRQGKTRL+KWY T   K+KAR +RE+T+ VL R  K CNF+EW+D+KIVYKRYASL+FVACI +++NELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEL IGG LQE SKKE+LRVC Q ++ MEE+KE+
Sbjct:    1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 148          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1685.3838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL7_ECTSI7.200e-10798.75AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4A8C4_9STRA3.490e-8981.88AP complex subunit sigma n=1 Tax=Pelagomonas calce... [more]
A0A835Z7C9_9STRA3.210e-8882.78AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S2SD76_9STRA6.260e-8680.39AP complex subunit sigma n=1 Tax=Rhizochromulina m... [more]
W7T3W8_9STRA1.150e-8582.43AP complex subunit sigma n=2 Tax=Monodopsidaceae T... [more]
A0A7S2XUT6_9STRA2.790e-8581.46AP complex subunit sigma n=1 Tax=Fibrocapsa japoni... [more]
A0A7S3LZF2_9STRA6.760e-8278.38AP complex subunit sigma n=1 Tax=Spumella elongata... [more]
A0A812YG65_SYMMI1.640e-7976.19AP complex subunit sigma (Fragment) n=1 Tax=Symbio... [more]
F0Y8T1_AURAN3.250e-7972.16AP complex subunit sigma n=1 Tax=Aureococcus anoph... [more]
A0A024THD2_9STRA4.130e-7674.32AP complex subunit sigma n=12 Tax=Saprolegniaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availableGENE3D3.30.450.60coord: 1..154
e-value: 3.0E-63
score: 214.1
NoneNo IPR availablePANTHERPTHR11753:SF5AP COMPLEX SUBUNIT SIGMAcoord: 2..151
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..140
e-value: 1.3E-56
score: 190.5
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..152
e-value: 6.5E-69
score: 228.6
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 2..151
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1685contigE-siliculosus-1a_F_contig1685:2393..6191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1685.3838.1mRNA_E-siliculosus-1a_F_contig1685.3838.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1685 1878..6406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1685.3838.1 ID=prot_E-siliculosus-1a_F_contig1685.3838.1|Name=mRNA_E-siliculosus-1a_F_contig1685.3838.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp
MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFV
EWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCE
LDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAA
NGNQGPSRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su