prot_E-siliculosus-1a_F_contig1667.3747.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1667.3747.1
Unique Nameprot_E-siliculosus-1a_F_contig1667.3747.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length509
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 3.910e-186
Identity = 281/305 (92.13%), Postives = 286/305 (93.77%), Query Frame = 0
Query:  204 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTILQSFIAFVGMSWCSLKTRIRWATACIRWRLGGRRNTSPQDRPRRPSLKMVLQGSTGVCGVDGRPVVMVRRPPESSTVLGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGVFQSPSSSGEYGNGTGGRNGGVTVPSTRRSSSTDSSRPMLRRWSSSTASR 508
            MLTFHKRMSIVTDTLSRASTHL+HFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAI LEAYRGV SGM GEDTI QSFIAFVGMSWCSL TRIRWATACIRWRLGGRRNTS      RPSLK+ LQGSTGVCGVDGRPVVMVRRPPESST+LGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGG FQSPSSSGEYGNGTGG NGGVT  + RR+SSTDSSRPM RR SSSTASR
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVASGMHGEDTIFQSFIAFVGMSWCSLTTRIRWATACIRWRLGGRRNTS------RPSLKIFLQGSTGVCGVDGRPVVMVRRPPESSTILGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGSFQSPSSSGEYGNGTGGGNGGVTATNLRRTSSTDSSRPMQRRPSSSTASR 299          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 4.260e-108
Identity = 170/187 (90.91%), Postives = 178/187 (95.19%), Query Frame = 0
Query:    1 MEDLGVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEANELVTAYILTGNAGQGSDRIRWILGLIFVCMTLAMIRHDTRKWYRARRAKARRNKCHCVCGFTFFTLIILNVLMWLGWASLGQVIAFDVVVQNTG-EESSVLDALVGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQ 186
            MEDL VIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEA+ELVTAYILTGNAGQG+DRIRWILGLIFVCMTLAMIRHDT+KWYRAR AKARRNKCHC CGFTFFTLIILNVLMWLGWASLG+VIAFDVV+Q T  EE SV+ AL GQ+LALQEAALFSW+LHIIFLLTTLAGLYRWIFQ
Sbjct:  339 MEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRARHAKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGKVIAFDVVLQGTSSEEDSVMAALTGQILALQEAALFSWSLHIIFLLTTLAGLYRWIFQ 525          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A6H5JES1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES1_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.760e-89
Identity = 159/226 (70.35%), Postives = 171/226 (75.66%), Query Frame = 0
Query:  304 NVVIAIFL-EAYRGVVSGMRGEDTILQSFIAFVGMSW--------------------CSLKTRIRWATACIRWRLGGRRNTSPQDRPRRPSLKMVLQGSTGVCGVDGRPVVMVRRPPESSTVLGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGVFQSPSSSGEYGNGTGGRNGGVTVPSTRRSSSTDSSRPMLRRWSSSTASR 508
            ++ +A+F+ +AYRGVVSGMRGEDTIL SFIAFVGMSW                    C LKT IRWATA IRWRL GRRNT PQD PRRPSL+M LQGSTGVCGVDGRPVVMVR  PESST+LGRQL              ALIEA PVPARVA RLVRKIVH+WVFRSDERITGGV QSPSSSGEYG+GTGG NGGVTV STRR+  TDSSRPMLRRWSS + SR
Sbjct:    4 SLALAVFVVKAYRGVVSGMRGEDTILPSFIAFVGMSWWVLHSRQTARQPEQILTSVSCVLKTGIRWATAYIRWRLAGRRNTPPQDGPRRPSLRMFLQGSTGVCGVDGRPVVMVRGLPESSTILGRQLPA------------ALIEAFPVPARVAGRLVRKIVHEWVFRSDERITGGVSQSPSSSGEYGSGTGGGNGGVTVLSTRRTYCTDSSRPMLRRWSSFSPSR 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.450e-76
Identity = 130/136 (95.59%), Postives = 131/136 (96.32%), Query Frame = 0
Query:  204 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTILQSFIAFVGMSW 339
            MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTL +AW SV RISLGESENFYPQILDAQPTVGPV VVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTI QSFIAFVGMSW
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTIFQSFIAFVGMSW 136          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 5.590e-64
Identity = 130/195 (66.67%), Postives = 134/195 (68.72%), Query Frame = 0
Query:  121 MWLGWASLGQVIAFDVVVQNTG-EESSVLDALVGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTTKEKLCSEGMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAY 314
            MWLGWASLG+VIA DVV+Q T  EE SVLDA                                                     MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAW+SV RISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAI LE +
Sbjct:    1 MWLGWASLGKVIANDVVLQGTSSEEDSVLDA-----------------------------------------------------MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 3.120e-50
Identity = 110/177 (62.15%), Postives = 119/177 (67.23%), Query Frame = 0
Query:  133 AFDVVVQNTGEES-SVLDALVGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTTKEKLCSEGMLTFHKRMSIVTDTLSRASTHLDHFLFVFFL--------------------------VILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDA 282
            AFDVV+Q+T  E+ SVL AL G +LALQEA LFSW+L+IIFLLTTLAGLY WIFQ                 M TFHKRMSIV DTLSRASTHL  FLFVFFL                          V+LAFAALT+LLVGSSTKE STLEDAWRSVIRIS GES+N YPQILDA
Sbjct:    2 AFDVVLQDTSSEADSVLGALTGPILALQEAELFSWSLYIIFLLTTLAGLYPWIFQ-----------------MFTFHKRMSIVPDTLSRASTHLTQFLFVFFLERLTQLPDKRCLGVLVLVVVLTTPMVVVLAFAALTFLLVGSSTKEISTLEDAWRSVIRISPGESDNLYPQILDA 161          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 3.450e-19
Identity = 96/337 (28.49%), Postives = 160/337 (47.48%), Query Frame = 0
Query:   10 DEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEANELVTAYILTGNAGQGSDRI-RWILGLIFVCMTLAMIRHDT-RKWYRARRAKARRNKC--HC-VCGFTFFTLIILNVLMW--LGWASLGQVIA-FDVVVQNTGEESSVLDALVGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTTKEKLCSEGMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAYRGVV--SGMRGEDTILQSFIAFVG 336
            D VRSV+++  TYNG     F  ++I   F  GGEV+    V  + +    G     + R I    F  M +  I  D  R W   R  + R +    H  V   T   L+   V +W  + W ++    A F+++   +   +S       + LAL   AL  W      +  ++ GL R                     ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S+  F+T   ++ ++ RI+LGE +N YP +++       +++V YQ L  +LLLN+VI+I L+A++ V   + +   DT+ Q+ +  +G
Sbjct:   60 DAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASEQVRAFSEELAL--VALERWKRDAAAVAGSIFGLTRLFI------------------MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 376          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A6H5JEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ3_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.540e-14
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 MEDLGVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDH 41
            MEDL VIPR EVRSVNVQLVTYNGNQGSAFGSIN+GFTFDH
Sbjct:   69 MEDLDVIPRHEVRSVNVQLVTYNGNQGSAFGSINLGFTFDH 109          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A8J5X0G5_DIALT (PKD_channel domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0G5_DIALT)

HSP 1 Score: 70.9 bits (172), Expect = 3.360e-9
Identity = 43/123 (34.96%), Postives = 71/123 (57.72%), Query Frame = 0
Query:  205 LTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTI 327
            L FH++ S+VT TL RA   L HFL VF +V++ +A + + ++G   + ++TL  A  S+  + + +    +  I+D  P VGPV    Y +L  ++L+NV++AI L+AY  V    R  + I
Sbjct:  540 LAFHQQFSLVTATLLRAGASLAHFLVVFAIVLVMYAFVGFNMLGHKLERYNTLGKAINSMCSMLVFDDTVSFADIMDVAPLVGPVFYWSYFILSSLMLINVLLAILLDAYASVSRASRTTNFI 662          
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Match: A0A7S1CFF4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFF4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.100e-5
Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  204 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTILQ 329
            +L F  R+ +VT T+ RA+  L HFL +F  V+ A+A +  +L GS+ KEF T+  ++ S + I LGE +     +L      G +    +  L   +L+NV++AI ++AY  V        T+++
Sbjct:  721 LLDFQPRLGLVTRTIWRAAMDLAHFLMLFTTVMGAYAVIGNVLFGSNLKEFRTVWHSFVSCLEILLGEVQLNEDLMLLEDQAFGVIYFWSFVGLSFFMLINVLLAIIVDAYVDVKKSAASSATVIE 846          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1667.3747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE3.910e-18692.13PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
D7FTQ4_ECTSI4.260e-10890.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JES1_9PHAE1.760e-8970.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ7_ECTSI3.450e-7695.59Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI5.590e-6466.67Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JIW8_9PHAE3.120e-5062.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W7_ECTSI3.450e-1928.49Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JEJ3_9PHAE3.540e-1492.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5X0G5_DIALT3.360e-934.96PKD_channel domain-containing protein n=2 Tax=Diac... [more]
A0A7S1CFF4_9STRA6.100e-531.75Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 204..315
e-value: 9.9E-17
score: 60.7
NoneNo IPR availableGENE3D1.10.287.70coord: 210..316
e-value: 1.6E-7
score: 33.1
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 205..321
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..227
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..508
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 248..291
NoneNo IPR availableTMHMMTMhelixcoord: 228..247
NoneNo IPR availableTMHMMTMhelixcoord: 66..83
NoneNo IPR availableTMHMMTMhelixcoord: 289..311
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1667contigE-siliculosus-1a_F_contig1667:1199..10297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1667.3747.1mRNA_E-siliculosus-1a_F_contig1667.3747.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1667 1169..10297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1667.3747.1 ID=prot_E-siliculosus-1a_F_contig1667.3747.1|Name=mRNA_E-siliculosus-1a_F_contig1667.3747.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=509bp
MEDLGVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEANEL
VTAYILTGNAGQGSDRIRWILGLIFVCMTLAMIRHDTRKWYRARRAKARR
NKCHCVCGFTFFTLIILNVLMWLGWASLGQVIAFDVVVQNTGEESSVLDA
LVGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQARDRSKNTTKEKLC
SEGMLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSS
TKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVV
LLLNVVIAIFLEAYRGVVSGMRGEDTILQSFIAFVGMSWCSLKTRIRWAT
ACIRWRLGGRRNTSPQDRPRRPSLKMVLQGSTGVCGVDGRPVVMVRRPPE
SSTVLGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFR
SDERITGGVFQSPSSSGEYGNGTGGRNGGVTVPSTRRSSSTDSSRPMLRR
WSSSTASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel