prot_E-siliculosus-1a_F_contig1617.3535.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1617.3535.1
Unique Nameprot_E-siliculosus-1a_F_contig1617.3535.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length232
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1617.3535.1 vs. uniprot
Match: D8LGR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR0_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 1.980e-139
Identity = 196/224 (87.50%), Postives = 207/224 (92.41%), Query Frame = 0 
Query:    8 MEWKKNGRDSHYMEGHHEYGQITTGTGSPFTFDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDPHPQRYMFVDSRPEHNWTMLQKNNDSGGIAGEFFMEHADVDDIHQPEARVSAQRLIAGDFLNGGEMAGGADYFIPVYIICALNGGESYLGLDDHDNVIRTGTPHVWYLRRGRNAISKRSISNAAMRAFDRSVASAAATATGVSAAADHGGS 231
            MEWKK+G DSHYM+GHHEYGQITT TGSPF FDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDP+PQRYMFVDSRPEHNWTMLQKN DSGGIAGEFF+EHADVD+I + EA  SAQRLIA DFLNGG+M G ADY IPVYIICALNGGESYLGLDDHDNVIRT  PHVWYL RGRNAI+KR+IS+AAM+ FDRSVASAAA ATGVSAAADHGGS
Sbjct:    1 MEWKKHGTDSHYMKGHHEYGQITTETGSPFAFDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDPNPQRYMFVDSRPEHNWTMLQKNFDSGGIAGEFFIEHADVDNIRKLEA--SAQRLIAADFLNGGKMEGKADYCIPVYIICALNGGESYLGLDDHDNVIRTDAPHVWYLGRGRNAIAKRNISDAAMKVFDRSVASAAAAATGVSAAADHGGS 222
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BLAST of mRNA_E-siliculosus-1a_F_contig1617.3535.1 vs. uniprot
Match: A0A6H5J7H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H6_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 1.290e-133
Identity = 174/187 (93.05%), Postives = 182/187 (97.33%), Query Frame = 0 
Query:    1 MSEPRWFMEWKKNGRDSHYMEGHHEYGQITTGTGSPFTFDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDPHPQRYMFVDSRPEHNWTMLQKNNDSGGIAGEFFMEHADVDDIHQPEARVSAQRLIAGDFLNGGEMAGGADYFIPVYIICALNGGESYLGLDDHDNVIRTGTPHVWY 187
            MSEPRWFMEWKKNGRDSHYMEGHHEYGQITTGTGSPFTFDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDPHPQRYMFVDSRP+HNWTMLQK+ DSGGIAGEFF+EHAD+DDI +PEA VSA+RLIA DFL+GGEM GGADYFIPVYIICALNGGESYLGLD+HDNVIRTGTPHVWY
Sbjct:    1 MSEPRWFMEWKKNGRDSHYMEGHHEYGQITTGTGSPFTFDGFRVRHLFKADPKLWKISLSGFRRPFRGVGDQPTHTIRNDPHPQRYMFVDSRPDHNWTMLQKDFDSGGIAGEFFLEHADLDDIRKPEAGVSAKRLIAADFLDGGEMQGGADYFIPVYIICALNGGESYLGLDNHDNVIRTGTPHVWY 187
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1617.3535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGR0_ECTSI1.980e-13987.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7H6_9PHAE1.290e-13393.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1617contigE-siliculosus-1a_F_contig1617:27292..27987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1617.3535.1mRNA_E-siliculosus-1a_F_contig1617.3535.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1617 27292..27987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1617.3535.1 ID=prot_E-siliculosus-1a_F_contig1617.3535.1|Name=mRNA_E-siliculosus-1a_F_contig1617.3535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=232bp
MSEPRWFMEWKKNGRDSHYMEGHHEYGQITTGTGSPFTFDGFRVRHLFKA
DPKLWKISLSGFRRPFRGVGDQPTHTIRNDPHPQRYMFVDSRPEHNWTML
QKNNDSGGIAGEFFMEHADVDDIHQPEARVSAQRLIAGDFLNGGEMAGGA
DYFIPVYIICALNGGESYLGLDDHDNVIRTGTPHVWYLRRGRNAISKRSI
SNAAMRAFDRSVASAAATATGVSAAADHGGS*
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