prot_E-siliculosus-1a_F_contig16023.3468.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: W1N7J4_9GAMM (HTH lysR-type domain-containing protein n=1 Tax=Halomonas huangheensis TaxID=1178482 RepID=W1N7J4_9GAMM) HSP 1 Score: 236 bits (601), Expect = 1.750e-75 Identity = 104/141 (73.76%), Postives = 124/141 (87.94%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQAFVEEFIHYMDGYNEDTRALCGD 141
M+CG HHPLF+ D++ LE LANE+FVSFSSD+IGGSLSPLTIFRDQH FTGKV+A SP YDEI+RLLVAGYGIGCLPQHSA++EV + RL++LPP+ G+CD+ELY+LWKK+ALTL QAFV+EFI YMD +NED RA C D
Sbjct: 170 MYCGVHHPLFDSDSVGLEALANEEFVSFSSDMIGGSLSPLTIFRDQHGFTGKVIATSPDYDEIVRLLVAGYGIGCLPQHSADVEVARARLKKLPPDGGICDIELYLLWKKDALTLAGQAFVDEFIRYMDRFNEDERAKCSD 310
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A0A1M7G725_9GAMM (DNA-binding transcriptional regulator, LysR family n=1 Tax=Halomonas cupida TaxID=44933 RepID=A0A1M7G725_9GAMM) HSP 1 Score: 231 bits (590), Expect = 7.390e-74 Identity = 104/139 (74.82%), Postives = 123/139 (88.49%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQAFVEEFIHYMDGYNEDTRALC 139
MFCG+ H LF +T LE LANEDFVSFSSD+IGGSLSPLTIFRDQH FTGKV+A SP+YDEI+RLL+AGYGIGCLP+HSA +EV++GRLR LPPEDG+CDVEL++LWKK+ALTL QAFV+EFIHYMD +++D RA C
Sbjct: 170 MFCGKGHHLFSAETTRLEDLANEDFVSFSSDIIGGSLSPLTIFRDQHGFTGKVIATSPNYDEIVRLLIAGYGIGCLPRHSAGLEVDRGRLRMLPPEDGICDVELHMLWKKDALTLAGQAFVDEFIHYMDDHDDDERARC 308
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A0A0H4WHM3_9BORD (HTH-type transcriptional regulator CysL n=5 Tax=Bordetella hinzii TaxID=103855 RepID=A0A0H4WHM3_9BORD) HSP 1 Score: 167 bits (422), Expect = 2.190e-48 Identity = 77/137 (56.20%), Postives = 103/137 (75.18%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQA-FVEEFIHYMDGYNEDTR 136
+FCG +H LF R I +E L E+FVSF+SD +G SLSPLTIFRDQ F+G+VVA S +DE+ RLL+AGYGIGCLP+HS +++E+GRL RLPP +GVC V+L++LW ++A PA+A F++ F Y+DGY R
Sbjct: 179 LFCGRNHRLFGRQDIRIEELLGENFVSFASDALGDSLSPLTIFRDQRGFSGRVVASSTQHDEVKRLLIAGYGIGCLPEHSVRLDLEQGRLWRLPPGEGVCSVDLHLLWHRDAHRTPAEAAFLKHFRDYIDGYPMSER 315
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: J4YX46_9BURK (LysR family transcriptional regulator n=5 Tax=Achromobacter TaxID=222 RepID=J4YX46_9BURK) HSP 1 Score: 164 bits (416), Expect = 2.020e-47 Identity = 75/137 (54.74%), Postives = 103/137 (75.18%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTR 136
+FCG +H LF + I +E L E+FVSF+SD +G SLSPLTIFRDQ F+G++VA S +DE+ RLL+AG+GIGCLP+HS ++E+GRL RLPP +GVC VEL++LW ++A PA+ AF++ F Y+DGY+ R
Sbjct: 181 LFCGRNHALFGKPDIRIEDLLGENFVSFASDALGDSLSPLTIFRDQRGFSGRIVASSTQHDEVKRLLIAGFGIGCLPEHSVQADLEQGRLWRLPPGEGVCSVELHLLWHRDAQLTPAETAFLKHFRDYIDGYSMAER 317
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A0A4Q1HJH5_9BURK (LysR family transcriptional regulator n=1 Tax=Achromobacter aloeverae TaxID=1750518 RepID=A0A4Q1HJH5_9BURK) HSP 1 Score: 163 bits (412), Expect = 7.460e-47 Identity = 77/142 (54.23%), Postives = 104/142 (73.24%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTRALCGD 141
+FCG +H LF + I +E L E+FVSF+SD +G SLSPLTIFRDQ F+G+VVA S +DE+ RLLVAG+GIGCLP+HS ++ +GRL RLPP +GVC V+L++LW ++A PA+ AF++ F Y+DGY+ R GD
Sbjct: 179 LFCGRNHALFGKPDIHIEDLLGENFVSFASDALGDSLSPLTIFRDQRGFSGRVVATSTQHDEVKRLLVAGFGIGCLPEHSVQADLAEGRLWRLPPGEGVCLVDLHLLWHRDAQRTPAEDAFLKHFRGYIDGYSMAERLAQGD 320
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A9IN41_BORPD (Transcriptional regulator, LysR-family n=3 Tax=Bordetella petrii TaxID=94624 RepID=A9IN41_BORPD) HSP 1 Score: 162 bits (409), Expect = 3.770e-46 Identity = 71/140 (50.71%), Postives = 104/140 (74.29%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTRALC 139
+FCG +H LF + + ++ L E+FVSF+SD +G SLSPLTIFRDQ F+G++VA S +DE+ RLL+AG+GIGCLP+HS ++E+GRL RLPP +GVC V+L++LW ++A A+ AF++ F Y+DG++ R +C
Sbjct: 205 LFCGRNHALFGKQDVRIDDLLGENFVSFASDALGDSLSPLTIFRDQRGFSGRIVASSTQHDEVKRLLIAGFGIGCLPEHSVQADIEQGRLWRLPPGEGVCTVDLHLLWHRDAQPTQAEMAFLKHFRDYIDGHSMAERLVC 344
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A0A6S7A583_9BURK (HTH-type transcriptional regulator ArgP n=2 Tax=Achromobacter TaxID=222 RepID=A0A6S7A583_9BURK) HSP 1 Score: 159 bits (401), Expect = 3.160e-45 Identity = 73/137 (53.28%), Postives = 101/137 (73.72%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTR 136
+FCG +H LF R I +E L E+FVSF+SD +G SLSPLTIFRDQ F+G++VA S +DE+ RLL+AG+GIGCLP+HS ++ +GRL RLPP +GVC V+L++LW ++A PA+ AF++ F Y+D Y+ R
Sbjct: 181 LFCGRNHALFGRQDIRIEDLLGENFVSFASDALGDSLSPLTIFRDQRGFSGRIVASSTHHDEVKRLLIAGFGIGCLPEHSVQADLAQGRLWRLPPGEGVCSVDLHLLWHRDAQHTPAEVAFLKHFRDYIDRYSMAER 317
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: A0A0D6I085_ALCXX (CysJI operon transcriptional activator n=34 Tax=Proteobacteria TaxID=1224 RepID=A0A0D6I085_ALCXX) HSP 1 Score: 158 bits (399), Expect = 6.940e-45 Identity = 73/137 (53.28%), Postives = 100/137 (72.99%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTR 136
+FCG +H LF R + +E L E+FVSF+SD +G SLSPLTIFRDQ F+G+VVA S +DE+ RLL+AG+GIGCLP+HS ++ +GRL RLPP +GVC V+L++LW ++A PA+ AF+ F Y+DG+ R
Sbjct: 180 LFCGRNHALFGRQDLRIEDLMGENFVSFASDALGDSLSPLTIFRDQRGFSGRVVATSTQHDEVKRLLIAGFGIGCLPEHSVRRDLAEGRLWRLPPGEGVCSVDLHLLWHRDAPRSPAEKAFLTHFRDYIDGFTMAER 316
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: UPI00136E6FD8 (LysR family transcriptional regulator n=1 Tax=Achromobacter aestuarii TaxID=2511204 RepID=UPI00136E6FD8) HSP 1 Score: 157 bits (397), Expect = 1.350e-44 Identity = 73/141 (51.77%), Postives = 103/141 (73.05%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTRALCG 140
+FCG +H LF R + +E L +E+FVSF+SD +G SLSPLTIFRDQ F+G+V+A S +DE+ RLL+AG GIGCLP+HS ++E+GRL RLPP +GVC V+L++LW +NA A+ AF++ F +DG++ + R G
Sbjct: 181 LFCGRNHALFGRPDLRIEDLMSENFVSFASDTLGDSLSPLTIFRDQRGFSGRVIATSNQHDEVKRLLIAGLGIGCLPEHSVQRDLEEGRLWRLPPGEGVCSVDLHLLWHRNAQRSSAELAFLKCFRDCIDGFSMEERLAAG 321
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Match: UPI001903DF1F (LysR family transcriptional regulator n=2 Tax=Pseudomonas TaxID=286 RepID=UPI001903DF1F) HSP 1 Score: 155 bits (392), Expect = 7.740e-44 Identity = 72/140 (51.43%), Postives = 99/140 (70.71%), Query Frame = 0
Query: 1 MFCGEHHPLFERDTITLETLANEDFVSFSSDVIGGSLSPLTIFRDQHAFTGKVVAMSPSYDEIIRLLVAGYGIGCLPQHSANIEVEKGRLRRLPPEDGVCDVELYILWKKNALTLPAQ-AFVEEFIHYMDGYNEDTRALC 139
+FCG++H L+ + +T+E L E+FVSF+SD +G SLSPLTIFRDQ F+G VVA S YDE+ RLLVAG+GIGCLP+HS ++E+GRL RLPP++GVC LY LW ++A A+ F++ F +++ Y R L
Sbjct: 178 LFCGQYHDLYGKSDLTMEDLLGENFVSFTSDALGDSLSPLTIFRDQRGFSGTVVASSSQYDEVKRLLVAGFGIGCLPEHSVQADLEEGRLWRLPPDEGVCTANLYFLWHEDAQRTAAERTFLDAFKAHIETYPLPHRLLA 317 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig16023.3468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig16023.3468.1 ID=prot_E-siliculosus-1a_F_contig16023.3468.1|Name=mRNA_E-siliculosus-1a_F_contig16023.3468.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=142bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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