prot_E-siliculosus-1a_F_contig157.3298.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig157.3298.1
Unique Nameprot_E-siliculosus-1a_F_contig157.3298.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length487
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig157.3298.1 vs. uniprot
Match: D8LCN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN4_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 3.060e-111
Identity = 191/217 (88.02%), Postives = 194/217 (89.40%), Query Frame = 0 
Query:    2 LFEALSREPARRKARARAKAELAEERARQKELRSAEAHDASERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHILSGPSGGARARRPPLATAGTVSSCDAAFDDAGHDDCGAGGAGVEGGVGYLWESPGVYGREHFPSSFE 218
            +F  L REPARRKARARAKAELAEER RQKELR+AEAHDASERLE YKKAGVY+VLKRIEVWQTRTGK LSESFRGSTGDG GNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHILSGPS G RARRPPLATAGTVSS DAAFDD             EGGVGYLWESPGVYGREHFPSSFE
Sbjct:  415 VFFFLDREPARRKARARAKAELAEERIRQKELRTAEAHDASERLEMYKKAGVYAVLKRIEVWQTRTGKHLSESFRGSTGDGTGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHILSGPSSGGRARRPPLATAGTVSSYDAAFDDXXXXXXXXXXXXXEGGVGYLWESPGVYGREHFPSSFE 631
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig157.3298.1 vs. uniprot
Match: A0A6H5JFG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG5_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 3.100e-110
Identity = 203/253 (80.24%), Postives = 210/253 (83.00%), Query Frame = 0 
Query:    1 MLFEALSREPARRKARARAKAELAEERARQKELRSAEAHDASERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHILSGPSGGARARRPPLATAGTVSSCDAAFDDAGHDDCGAGGAGVEGGVGY-------LWESPGVYGRE-HFPSSFELMQD-----GPAVFRPPLEIITHGRAS 240
            MLFEALSREPARRKARARAKAELAEERARQ+ELR+AEAHDA ERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDH+LSGPSGG RARRP LATAGTVS+CDAAFDDAGHDD GAGGAG EGGVG        LW S    GR    P + E         G  + RPP   +    AS
Sbjct:  591 MLFEALSREPARRKARARAKAELAEERARQQELRTAEAHDALERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHVLSGPSGGGRARRPLLATAGTVSTCDAAFDDAGHDDRGAGGAGKEGGVGMDRRYSAPLWTSLPTAGRRLRLPEAEEANAGHSSPAGVRLLRPPTPAVATVAAS 843
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig157.3298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCN4_ECTSI3.060e-11188.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFG5_9PHAE3.100e-11080.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..36
NoneNo IPR availableGENE3D1.10.238.10coord: 2..139
e-value: 2.4E-5
score: 26.3
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 69..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig157contigE-siliculosus-1a_F_contig157:45656..48965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig157.3298.1mRNA_E-siliculosus-1a_F_contig157.3298.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig157 45619..49242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig157.3298.1 ID=prot_E-siliculosus-1a_F_contig157.3298.1|Name=mRNA_E-siliculosus-1a_F_contig157.3298.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=487bp
MLFEALSREPARRKARARAKAELAEERARQKELRSAEAHDASERLEKYKK
AGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNL
DFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDH
ILSGPSGGARARRPPLATAGTVSSCDAAFDDAGHDDCGAGGAGVEGGVGY
LWESPGVYGREHFPSSFELMQDGPAVFRPPLEIITHGRASTAPARGRRSQ
RGTLVASRRPTTAATDTGSCDGSGNRPPLARAGGTASRELGAAWAGRLVG
GAGDVASGSGRGVAGGGVARPGSGGSGAHGGSPAADSIHALQQQQQQQRR
RQTRRSPHPVPHRGISSKRFLEDGGDGAVIGRAAGRANKGRNALAVEVVG
KPGAADTDRAAGSATSASSAAAVAAEGVEEPQSPWVLGLRDEWWPTAMSA
VEDGARLNIYTGSVLDGRWLNSLDARLTRTMRATRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair