prot_E-siliculosus-1a_F_contig157.3297.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig157.3297.1
Unique Nameprot_E-siliculosus-1a_F_contig157.3297.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length892
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig157.3297.1 vs. uniprot
Match: A0A6H5JFG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG5_9PHAE)

HSP 1 Score: 894 bits (2309), Expect = 3.960e-314
Identity = 496/577 (85.96%), Postives = 523/577 (90.64%), Query Frame = 0
Query:  318 MPTVDQYIFEDSITYGAITKRGQSKALPLNVASGGALGLGQPGGDSSKGVAFVGAGGDDTESYVDPSALLFADEDIDKLLKFFDKAGRGEDKVTLEEMISGFRRIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQTDTAGGGLETTNGPSIDHRSSSIGVAKDVSIVERAEKQGNGSSHAQDHGHQAPADHGRHRNHEGVEETDPTQHNHSSGHNQGCTTINGDTNSSITPGGNPDPIQEPDPRRAGRGGERGQQGESEPLGGSAQGDASGSSLGSAVAMGHRQPEGTHGASLYGDSGSVDARRLSRGMNVLSGSPCGGGIDGXXXXXXXXXXXXXXXXXXT--RSEEEPGYEIDRCESDLVPTRAKERPSAGQEQRCGADNQAGQIENNKEEGAESRTRTSSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLIRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDRR 892
            MPTVDQYIFE+SITYGAI KRGQSKALPL VAS GALG+GQPGGDSSKGVAFVGAGG+ TESYVDPSALLFADEDIDKLLKFFD AGRG+DKVTLEEMISGFR+IRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQ D AG G ET NG SI+ RSSS GVAKD+SIVER  KQ N SSHAQDHGHQAP+D G+H +HEG EETDPTQHNHSS H+QGCTTIN DT+SSITP G PDP +EP+P+RAG  GERGQQ ES+PLGGSAQG ASG SLGSA  MGH + +G  GASLYGDSGSVDARRLS+GMNVL G+ CGGG+  XXXXXXXXXXXXXXXXX    RSEEEPG+EID CESDLVP  AKE PSAGQEQ CGA NQAG IEN KEEG +SRTRTSSID+LNAGRA+ACREHALDGMVYLGQRAYFLGLE+ETFTSKDVSDL+RFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFF LDRR
Sbjct:    1 MPTVDQYIFEESITYGAIRKRGQSKALPLKVASRGALGIGQPGGDSSKGVAFVGAGGNYTESYVDPSALLFADEDIDKLLKFFDNAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDPAGDGFETANGTSINCRSSSSGVAKDLSIVERTGKQENSSSHAQDHGHQAPSDRGKHHHHEGFEETDPTQHNHSSSHHQGCTTINRDTSSSITPDGIPDPTEEPEPKRAGGEGERGQQEESKPLGGSAQGAASGGSLGSAFPMGHHRSQGARGASLYGDSGSVDARRLSQGMNVLPGNRCGGGVXXXXXXXXXXXXXXXXXXXTIARRSEEEPGHEIDHCESDLVPMGAKEGPSAGQEQWCGAGNQAGPIENYKEEGVKSRTRTSSIDMLNAGRAVACREHALDGMVYLGQRAYFLGLENETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFCLDRR 577          
BLAST of mRNA_E-siliculosus-1a_F_contig157.3297.1 vs. uniprot
Match: D8LCN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN4_ECTSI)

HSP 1 Score: 642 bits (1655), Expect = 3.300e-218
Identity = 392/576 (68.06%), Postives = 401/576 (69.62%), Query Frame = 0
Query:  318 MPTVDQYIFEDSITYGAITKRGQSKALPLNVASGGALGLGQPGGDSSKGVAFVGAGGDDTESYVDPSALLFADEDIDKLLKFFDKAGRGEDKVTLEEMISGFRRIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQTDTAGGGLETTNGPSIDHRSSSIGVAKDVSIVERAEKQGNGSSHAQDHGHQAPADHGRHRNHEGVEETDPTQHNHSSGHNQGCTTINGDTNSSITPGGNPDPIQEPDPRRAGRGGERGQQGESEPLGGSAQGDASGSSLGSAVAMGHRQPEGTHGASLYGDSGSVDARRLSRGMNVLSGSPCGGGIDGXXXXXXXXXXXXXXXXXX--TRSEEEPGYEIDRCESDLVPTRAKERPSAGQEQRCGADNQAGQIENNKEEGAESRTRTSSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLIRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDR 891
            MPTVDQYIFED ITYGAITKRG SKALPLN+ASGGALG+GQPGGDSSKG+AFVGAGGDDTESYVDPSALLFADEDIDKLLKFFDKAGRG+DKVTLEEMISGFR+IRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMD SQ                                                                                                                                                           EPDPR AG GGERGQQGES+PLGGSAQGD SG SLGSAV MGH QPEGTHGASLYGD+GSVDARRLSR MNVLSGSPCGGGIDGXXXXXXXXXXXXXXX     TRS+EEPGYEIDRCESDLVPT AKERPSAGQEQ CG DNQAG IENNKEEGAESRTR SSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDL+RFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDR
Sbjct:    1 MPTVDQYIFEDGITYGAITKRGHSKALPLNIASGGALGIGQPGGDSSKGIAFVGAGGDDTESYVDPSALLFADEDIDKLLKFFDKAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDTSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------EPDPRHAGGGGERGQQGESKPLGGSAQGDVSGGSLGSAVPMGHHQPEGTHGASLYGDNGSVDARRLSRVMNVLSGSPCGGGIDGXXXXXXXXXXXXXXXSNTIVTRSDEEPGYEIDRCESDLVPTGAKERPSAGQEQWCGTDNQAGHIENNKEEGAESRTRASSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDR 421          
BLAST of mRNA_E-siliculosus-1a_F_contig157.3297.1 vs. uniprot
Match: A0A7S2B085_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B085_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.210e-8
Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 0
Query:  384 SALLFADEDIDKLLKFFDKAGRGED-----KVTLEEMISGFRRIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGF 481
            +A  F+ ++I K+L + D  G  +D     K++L E+   FRR +R  A  + E  GR  + K+  LM +  +++EEWFK MD SQ G GDG ++ LELR G 
Sbjct:   30 AAAGFSMKEIRKVLNYIDSMGEPDDGPSDGKISLRELDQAFRRAKRARAGKEYEVLGRECVYKLEALMEQCDVTVEEWFKEMDNSQGGKGDGTVSTLELRRGL 132          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig157.3297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JFG5_9PHAE3.960e-31485.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCN4_ECTSI3.300e-21868.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B085_9STRA5.210e-838.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig157contigE-siliculosus-1a_F_contig157:39792..45106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig157.3297.1mRNA_E-siliculosus-1a_F_contig157.3297.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig157 39792..45106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig157.3297.1 ID=prot_E-siliculosus-1a_F_contig157.3297.1|Name=mRNA_E-siliculosus-1a_F_contig157.3297.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=892bp
MDAGRPEHYSSYPPTTPGMVAEEQEGLVSSTSRPASYGGQPASGGAAASG
SRAATTGSSPRLERNSSNDVNRTRDGLVNLAPSLGRYGSRGHSSLAVPVA
GGHDRSDGGNGKSRTVPSSEQHGGGQDGGRVRSKHQVSLRPISRTQPGYV
YSKKMTLGCTPSPASKKALARKRRTPAATGAGGGVPAVRSMLPWWQNIYT
LVRQANVNAPGQATGLESQDSNVFLRGTPTGGAVGGERTSPHQQRVSPTP
PESKHIFDEGGGDANEQQQSNSDKIERSPLSPNGVDAIPSSQRNDGGQHV
EKAYAHYSNLFENPPPTMPTVDQYIFEDSITYGAITKRGQSKALPLNVAS
GGALGLGQPGGDSSKGVAFVGAGGDDTESYVDPSALLFADEDIDKLLKFF
DKAGRGEDKVTLEEMISGFRRIRRKWATVKAERAGRVVLAKVVRLMRRAG
MSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKC
NRIPNYGLPPLTGPQTDTAGGGLETTNGPSIDHRSSSIGVAKDVSIVERA
EKQGNGSSHAQDHGHQAPADHGRHRNHEGVEETDPTQHNHSSGHNQGCTT
INGDTNSSITPGGNPDPIQEPDPRRAGRGGERGQQGESEPLGGSAQGDAS
GSSLGSAVAMGHRQPEGTHGASLYGDSGSVDARRLSRGMNVLSGSPCGGG
IDGGGGGGGGGGGGGRSNTVVTRSEEEPGYEIDRCESDLVPTRAKERPSA
GQEQRCGADNQAGQIENNKEEGAESRTRTSSIDVLNAGRAIACREHALDG
MVYLGQRAYFLGLESETFTSKDVSDLIRFIDTDVDFSLDIREMRLAISRL
HADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDRR
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