prot_E-siliculosus-1a_F_contig15541.3211.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig15541.3211.1
Unique Name	prot_E-siliculosus-1a_F_contig15541.3211.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	317

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A651E183_HALSX (Choline dehydrogenase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651E183_HALSX)

HSP 1 Score: 552 bits (1423), Expect = 1.240e-193
Identity = 282/317 (88.96%), Postives = 295/317 (93.06%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            RSNLTLWHS QVNRL+F+R P ERQ  EQ D L+CTGVEVEREGK QRA V+GE     VVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVY+I NGKTLN+MA+TL GKAGIGLEYLL+RSGPMSMAPSQLGAFTRS  EQTHPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQ+DDEL RLAGDIGTTIFHPVGTTRMGR+DDE+AVVDARL+VRGISGLRVADA VM
Sbjct:  222 RSNLTLWHSTQVNRLVFDRLPLERQASEQTDILKCTGVEVEREGKTQRATVSGE-----VVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYRINNGKTLNSMANTLWGKAGIGLEYLLRRSGPMSMAPSQLGAFTRSAEEQTHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSGDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQSDDELARLAGDIGTTIFHPVGTTRMGREDDEMAVVDARLKVRGISGLRVADAGVM 533

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A7Y6R925_9GAMM (GMC family oxidoreductase N-terminal domain-containing protein n=5 Tax=Halomonas TaxID=2745 RepID=A0A7Y6R925_9GAMM)

HSP 1 Score: 526 bits (1354), Expect = 3.580e-183
Identity = 271/317 (85.49%), Postives = 288/317 (90.85%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRLLFE+Q          + LRCTGVEVER+G+ QRAMV+GE     VVLCAGAIG+PHLLQLSGVG  ELL E GVELVHELPGVGENLQDHLQIRS+YKITNGKTLNA+ASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRS AEQT+PNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLS+PED+KVAADSLRVTRRIAEQPAFA+YAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGT +MGR+DD +AVVD+RLRV GISGLRVADA +M
Sbjct:  229 RDNLTLWHSTQVNRLLFEKQG---------EALRCTGVEVERDGQVQRAMVSGE-----VVLCAGAIGTPHLLQLSGVGSRELLNEQGVELVHELPGVGENLQDHLQIRSIYKITNGKTLNAIASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSSAEQTYPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSSPEDRKVAADSLRVTRRIAEQPAFARYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTAKMGREDDAMAVVDSRLRVHGISGLRVADASIM 531

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A511UNJ4_9GAMM (Choline dehydrogenase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UNJ4_9GAMM)

HSP 1 Score: 520 bits (1339), Expect = 1.120e-180
Identity = 266/317 (83.91%), Postives = 281/317 (88.64%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRLLFE         EQ  T RC GVE+ER GK QRA++N E G  EVVLC GAIG+PHLLQLSGVGP E+LREHGVE+VH+LPGVGENLQDHLQIRSVYKITNGKTLNAM STL GKAGI +EYLLKRSGPMSMAPSQLGAFTRS  +Q HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKY PEEVKPG+EYQ+DDEL RLAGDIGTTIFHPVGT RMG +DDE+AVVD RLRVRGISGLRVADA VM
Sbjct:  234 RGNLTLWHSTQVNRLLFE---------EQAGTPRCAGVELERGGKVQRAVLNKERGNAEVVLCTGAIGTPHLLQLSGVGPGEVLREHGVEVVHDLPGVGENLQDHLQIRSVYKITNGKTLNAMTSTLWGKAGIAMEYLLKRSGPMSMAPSQLGAFTRSTPDQPHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYTPEEVKPGLEYQSDDELARLAGDIGTTIFHPVGTARMGSEDDEMAVVDPRLRVRGISGLRVADASVM 541

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A653VV55_9GAMM (Alcohol dehydrogenase (Acceptor) n=21 Tax=root TaxID=1 RepID=A0A653VV55_9GAMM)

HSP 1 Score: 518 bits (1335), Expect = 2.830e-180
Identity = 267/317 (84.23%), Postives = 282/317 (88.96%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRLLFE+           + LRCTGVEVEREG P R M N E     VVLCAGAIG+PHLLQLSGVGPAE LR+HGVE+VHELPGVGENLQDHLQIRS+Y+ITNGKTLNA+ASTL GKAGIGLEYL KRSGPMSMAPSQLGAFTRS  +Q HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQ+DDEL RLAGDIGTTIFHPVGT RMG++DD +AVVDARLRVRGISGLRVADA VM
Sbjct:  228 RKNLTLWHSTQVNRLLFEKS---------ANMLRCTGVEVEREGSPLRVMANRE-----VVLCAGAIGTPHLLQLSGVGPAESLRKHGVEVVHELPGVGENLQDHLQIRSIYRITNGKTLNAIASTLWGKAGIGLEYLFKRSGPMSMAPSQLGAFTRSTKDQPHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQSDDELARLAGDIGTTIFHPVGTARMGQEDDAMAVVDARLRVRGISGLRVADASVM 530

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A455UKJ1_9GAMM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455UKJ1_9GAMM)

HSP 1 Score: 508 bits (1309), Expect = 5.080e-179
Identity = 260/317 (82.02%), Postives = 281/317 (88.64%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R+NLTLWHS QVNRL+F  Q            LRC G+EVER+G+ QR  V+GE     VVLCAGAIG+PHLLQLSGVGPAEL+REHG+ELVH+LPGVGENLQDHLQIRSVYKITNGKTLNA+ASTL GKAGIG EYL+KRSGPMSMAPSQLGAFTRS  EQ HPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSS+PRQAPAISPN+LS+PED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDEL RLAGDIGTTIFHPVGT +MGR++D +AVVD RLRVRGI GLRVADA +M
Sbjct:   53 RNNLTLWHSTQVNRLVFAGQ---------AGALRCAGIEVERDGEVQRVTVSGE-----VVLCAGAIGTPHLLQLSGVGPAELMREHGIELVHDLPGVGENLQDHLQIRSVYKITNGKTLNAIASTLWGKAGIGWEYLVKRSGPMSMAPSQLGAFTRSTEEQVHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSNPRQAPAISPNHLSSPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELARLAGDIGTTIFHPVGTAKMGREEDAMAVVDGRLRVRGIGGLRVADASIM 355

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A2A3XDV8_9GAMM (Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XDV8_9GAMM)

HSP 1 Score: 508 bits (1308), Expect = 2.610e-176
Identity = 265/317 (83.60%), Postives = 276/317 (87.07%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRL F          E+    RC+GVEVER G  QRA V+GE     VVLCAGAIG+PHLLQLSGVGPAELLR+HGV LVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTL GKAGIGLEYLLKRSGPMSMAPSQLGAFTRS  E  HPNIQYHVQPLSLEAFGQPLH+YPAITASVCNLNPTSRGTVRLKSSDP QAPAISPNYLSTPED+KVAADSLRVTR IAEQPAF KYAPEEVKPG EYQ+DDEL RLAGDIGTTIFHPVGT RMGR DD +AVVDARLRVRGI+GLRVADA +M
Sbjct:  222 RDNLTLWHSTQVNRLCFN---------EEGGMPRCSGVEVERNGSAQRATVSGE-----VVLCAGAIGTPHLLQLSGVGPAELLRKHGVTLVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLWGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSSPEHAHPNIQYHVQPLSLEAFGQPLHAYPAITASVCNLNPTSRGTVRLKSSDPHQAPAISPNYLSTPEDRKVAADSLRVTRHIAEQPAFNKYAPEEVKPGAEYQSDDELARLAGDIGTTIFHPVGTARMGRKDDVMAVVDARLRVRGINGLRVADASIM 524

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A0D7UVA7_9GAMM (Choline dehydrogenase n=40 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7UVA7_9GAMM)

HSP 1 Score: 494 bits (1273), Expect = 6.720e-171
Identity = 255/318 (80.19%), Postives = 275/318 (86.48%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLF-ERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRL F E QP          TLRCTGVEV R GKPQR     E     VVLCAGAIGSPHLLQLSG+GPAE LREHG+E+VH+LPGVGENLQDHLQIRSVY+++N KTLNA+ASTL G+AGIG EY+ KR+GPMSMAPSQLGAFTRS  +Q +PNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS+DPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKY PEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMG+ DD +AVVD +LRV G+ GLR+ADA VM
Sbjct:  227 RDNLTLWHSTQVNRLCFDEEQP----------TLRCTGVEVVRSGKPQRVQARKE-----VVLCAGAIGSPHLLQLSGIGPAEHLREHGIEVVHDLPGVGENLQDHLQIRSVYRVSNAKTLNAIASTLWGRAGIGWEYVTKRTGPMSMAPSQLGAFTRSSDDQPYPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSADPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYLPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGKRDDPMAVVDEKLRVLGVVGLRIADAGVM 529

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A1U9R5X0_9GAMM (Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R5X0_9GAMM)

HSP 1 Score: 491 bits (1263), Expect = 1.690e-169
Identity = 254/317 (80.13%), Postives = 269/317 (84.86%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVN+L FE++          DT RC  VEV R G+P R     E     VVLCAGAIGSPHLL LSGVGPAE LREH + LVH+LPGVGENLQDHLQIRSVY+++N KTLN MASTLLGKA IG EYL KR+GPMSMAPSQLGAFTRS  E THPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAP+ISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDEL RLAGDIGTTIFHPVGTTRMGR DD +AVVDARLRVRG+ GLRVADA +M
Sbjct:  222 RDNLTLWHSTQVNQLCFEKEQ---------DTPRCCAVEVVRNGEPVRVSAQKE-----VVLCAGAIGSPHLLLLSGVGPAEHLREHNIALVHDLPGVGENLQDHLQIRSVYRVSNAKTLNVMASTLLGKAAIGWEYLTKRTGPMSMAPSQLGAFTRSSDEYTHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSCDPRQAPSISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELARLAGDIGTTIFHPVGTTRMGRADDPMAVVDARLRVRGVKGLRVADAGIM 524

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A7Z7MXZ2_9GAMM (Choline dehydrogenase n=1 Tax=Halomonas sp. hl-4 TaxID=1761789 RepID=A0A7Z7MXZ2_9GAMM)

HSP 1 Score: 479 bits (1232), Expect = 9.060e-165
Identity = 247/317 (77.92%), Postives = 270/317 (85.17%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRL FE      Q         C+G+EV R+ K     VN      EVVLCAGAIGSPHLLQLSGVGPA+LLREH +++VH+LPGVGENLQDHLQIRSVY+++  KTLNAMASTL GKAGIG EYL KR+GPMSMAPSQLGAFTRS  + +HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAPAISPNYLSTPED+KVAADSLRVTR+IAEQPAFAKY PEEVKPG+EYQ+DDEL RLAGDIGTTIFHPVGT RMGR+DD +AVVD++LRVRGISGLRVADA VM
Sbjct:  221 RGNLTLWHSTQVNRLCFEHNEGATQ---------CSGIEVVRDAKT--VQVNASR---EVVLCAGAIGSPHLLQLSGVGPADLLREHDIKVVHDLPGVGENLQDHLQIRSVYRVSKAKTLNAMASTLWGKAGIGWEYLTKRTGPMSMAPSQLGAFTRSSDDYSHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSRDPRQAPAISPNYLSTPEDRKVAADSLRVTRKIAEQPAFAKYQPEEVKPGLEYQSDDELARLAGDIGTTIFHPVGTARMGREDDSMAVVDSQLRVRGISGLRVADASVM 523

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BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: UPI00201F7AB8 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F7AB8)

HSP 1 Score: 470 bits (1210), Expect = 2.020e-161
Identity = 244/317 (76.97%), Postives = 267/317 (84.23%), Query Frame = 0

Query:    1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 317
            R NLTLWHS QVNRL  E         ++   LRC GVEV R GK  +A    E     VVLCAGAIG+PHLL LSG+GPAE LREH +E++H+LPGVGENLQDHLQIRSVY+++N KTLNAMASTL+GK GIG EYL +R+GPMSMAPSQLGAFTRS  E  HPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAP+ISPNYLSTPED+KVAADSLRVTRRIA QPAFAKYAPEEVKPG+EYQTD+EL  LAGDIGTTIFHPVGTTRMG+ DD +AVVDA+LRVRG+ GLRVADA VM
Sbjct:  222 RDNLTLWHSTQVNRLHIE---------DENGVLRCGGVEVVRGGKVIKAKALKE-----VVLCAGAIGTPHLLLLSGIGPAEHLREHEIEVIHDLPGVGENLQDHLQIRSVYRVSNAKTLNAMASTLMGKVGIGWEYLTRRTGPMSMAPSQLGAFTRSADEYPHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSRDPRQAPSISPNYLSTPEDRKVAADSLRVTRRIAGQPAFAKYAPEEVKPGIEYQTDEELALLAGDIGTTIFHPVGTTRMGKVDDPMAVVDAKLRVRGVRGLRVADAGVM 524

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A651E183_HALSX	1.240e-193	88.96	Choline dehydrogenase n=1 Tax=Halomonas sp. TaxID=...	[more]
A0A7Y6R925_9GAMM	3.580e-183	85.49	GMC family oxidoreductase N-terminal domain-contai...	[more]
A0A511UNJ4_9GAMM	1.120e-180	83.91	Choline dehydrogenase n=1 Tax=Halovibrio variabili...	[more]
A0A653VV55_9GAMM	2.830e-180	84.23	Alcohol dehydrogenase (Acceptor) n=21 Tax=root Tax...	[more]
A0A455UKJ1_9GAMM	5.080e-179	82.02	GMC_OxRdtase_N domain-containing protein n=1 Tax=H...	[more]
A0A2A3XDV8_9GAMM	2.610e-176	83.60	Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745...	[more]
A0A0D7UVA7_9GAMM	6.720e-171	80.19	Choline dehydrogenase n=40 Tax=Halomonadaceae TaxI...	[more]
A0A1U9R5X0_9GAMM	1.690e-169	80.13	Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745...	[more]
A0A7Z7MXZ2_9GAMM	9.060e-165	77.92	Choline dehydrogenase n=1 Tax=Halomonas sp. hl-4 T...	[more]
UPI00201F7AB8	2.020e-161	76.97	GMC family oxidoreductase N-terminal domain-contai...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal	PFAM	PF00732	GMC_oxred_N	coord: 2..106 e-value: 2.0E-22 score: 79.9
IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal	PROSITE	PS00624	GMC_OXRED_2	coord: 65..79
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 1..140 e-value: 2.5E-32 score: 114.2
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 277..317 e-value: 2.7E-8 score: 35.5
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 26..317
None	No IPR available	GENE3D	3.30.410.40		coord: 141..276 e-value: 9.5E-24 score: 86.3
None	No IPR available	PANTHER	PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	coord: 1..317
None	No IPR available	PANTHER	PTHR11552:SF147	CHOLINE DEHYDROGENASE, MITOCHONDRIAL	coord: 1..317
None	No IPR available	SUPERFAMILY	54373	FAD-linked reductases, C-terminal domain	coord: 101..284
IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal	PFAM	PF05199	GMC_oxred_C	coord: 198..316 e-value: 3.5E-30 score: 105.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig15541	contig	E-siliculosus-1a_F_contig15541:3..953 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig15541.3211.1	mRNA_E-siliculosus-1a_F_contig15541.3211.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig15541 3..953 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig15541.3211.1 ID=prot_E-siliculosus-1a_F_contig15541.3211.1|Name=mRNA_E-siliculosus-1a_F_contig15541.3211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=317bp
RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAM
VNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGE
NLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPS
QLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTS
RGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKY
APEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDAR
LRVRGISGLRVADADVM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007867	GMC_OxRtase_C
IPR036188	FAD/NAD-bd_sf
IPR000172	GMC_OxRdtase_N