mRNA_E-siliculosus-1a_F_contig15541.3211.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A651E183_HALSX (Choline dehydrogenase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651E183_HALSX) HSP 1 Score: 552 bits (1423), Expect = 1.240e-193 Identity = 282/317 (88.96%), Postives = 295/317 (93.06%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
RSNLTLWHS QVNRL+F+R P ERQ EQ D L+CTGVEVEREGK QRA V+GE VVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVY+I NGKTLN+MA+TL GKAGIGLEYLL+RSGPMSMAPSQLGAFTRS EQTHPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQ+DDEL RLAGDIGTTIFHPVGTTRMGR+DDE+AVVDARL+VRGISGLRVADA VM
Sbjct: 222 RSNLTLWHSTQVNRLVFDRLPLERQASEQTDILKCTGVEVEREGKTQRATVSGE-----VVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYRINNGKTLNSMANTLWGKAGIGLEYLLRRSGPMSMAPSQLGAFTRSAEEQTHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSGDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQSDDELARLAGDIGTTIFHPVGTTRMGREDDEMAVVDARLKVRGISGLRVADAGVM 533
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A7Y6R925_9GAMM (GMC family oxidoreductase N-terminal domain-containing protein n=5 Tax=Halomonas TaxID=2745 RepID=A0A7Y6R925_9GAMM) HSP 1 Score: 526 bits (1354), Expect = 3.580e-183 Identity = 271/317 (85.49%), Postives = 288/317 (90.85%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRLLFE+Q + LRCTGVEVER+G+ QRAMV+GE VVLCAGAIG+PHLLQLSGVG ELL E GVELVHELPGVGENLQDHLQIRS+YKITNGKTLNA+ASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRS AEQT+PNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLS+PED+KVAADSLRVTRRIAEQPAFA+YAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGT +MGR+DD +AVVD+RLRV GISGLRVADA +M
Sbjct: 229 RDNLTLWHSTQVNRLLFEKQG---------EALRCTGVEVERDGQVQRAMVSGE-----VVLCAGAIGTPHLLQLSGVGSRELLNEQGVELVHELPGVGENLQDHLQIRSIYKITNGKTLNAIASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSSAEQTYPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSSPEDRKVAADSLRVTRRIAEQPAFARYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTAKMGREDDAMAVVDSRLRVHGISGLRVADASIM 531
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A511UNJ4_9GAMM (Choline dehydrogenase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UNJ4_9GAMM) HSP 1 Score: 520 bits (1339), Expect = 1.120e-180 Identity = 266/317 (83.91%), Postives = 281/317 (88.64%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRLLFE EQ T RC GVE+ER GK QRA++N E G EVVLC GAIG+PHLLQLSGVGP E+LREHGVE+VH+LPGVGENLQDHLQIRSVYKITNGKTLNAM STL GKAGI +EYLLKRSGPMSMAPSQLGAFTRS +Q HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKY PEEVKPG+EYQ+DDEL RLAGDIGTTIFHPVGT RMG +DDE+AVVD RLRVRGISGLRVADA VM
Sbjct: 234 RGNLTLWHSTQVNRLLFE---------EQAGTPRCAGVELERGGKVQRAVLNKERGNAEVVLCTGAIGTPHLLQLSGVGPGEVLREHGVEVVHDLPGVGENLQDHLQIRSVYKITNGKTLNAMTSTLWGKAGIAMEYLLKRSGPMSMAPSQLGAFTRSTPDQPHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYTPEEVKPGLEYQSDDELARLAGDIGTTIFHPVGTARMGSEDDEMAVVDPRLRVRGISGLRVADASVM 541
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A653VV55_9GAMM (Alcohol dehydrogenase (Acceptor) n=21 Tax=root TaxID=1 RepID=A0A653VV55_9GAMM) HSP 1 Score: 518 bits (1335), Expect = 2.830e-180 Identity = 267/317 (84.23%), Postives = 282/317 (88.96%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRLLFE+ + LRCTGVEVEREG P R M N E VVLCAGAIG+PHLLQLSGVGPAE LR+HGVE+VHELPGVGENLQDHLQIRS+Y+ITNGKTLNA+ASTL GKAGIGLEYL KRSGPMSMAPSQLGAFTRS +Q HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQ+DDEL RLAGDIGTTIFHPVGT RMG++DD +AVVDARLRVRGISGLRVADA VM
Sbjct: 228 RKNLTLWHSTQVNRLLFEKS---------ANMLRCTGVEVEREGSPLRVMANRE-----VVLCAGAIGTPHLLQLSGVGPAESLRKHGVEVVHELPGVGENLQDHLQIRSIYRITNGKTLNAIASTLWGKAGIGLEYLFKRSGPMSMAPSQLGAFTRSTKDQPHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQSDDELARLAGDIGTTIFHPVGTARMGQEDDAMAVVDARLRVRGISGLRVADASVM 530
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A455UKJ1_9GAMM (GMC_OxRdtase_N domain-containing protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455UKJ1_9GAMM) HSP 1 Score: 508 bits (1309), Expect = 5.080e-179 Identity = 260/317 (82.02%), Postives = 281/317 (88.64%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R+NLTLWHS QVNRL+F Q LRC G+EVER+G+ QR V+GE VVLCAGAIG+PHLLQLSGVGPAEL+REHG+ELVH+LPGVGENLQDHLQIRSVYKITNGKTLNA+ASTL GKAGIG EYL+KRSGPMSMAPSQLGAFTRS EQ HPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKSS+PRQAPAISPN+LS+PED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDEL RLAGDIGTTIFHPVGT +MGR++D +AVVD RLRVRGI GLRVADA +M
Sbjct: 53 RNNLTLWHSTQVNRLVFAGQ---------AGALRCAGIEVERDGEVQRVTVSGE-----VVLCAGAIGTPHLLQLSGVGPAELMREHGIELVHDLPGVGENLQDHLQIRSVYKITNGKTLNAIASTLWGKAGIGWEYLVKRSGPMSMAPSQLGAFTRSTEEQVHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSSNPRQAPAISPNHLSSPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELARLAGDIGTTIFHPVGTAKMGREEDAMAVVDGRLRVRGIGGLRVADASIM 355
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A2A3XDV8_9GAMM (Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XDV8_9GAMM) HSP 1 Score: 508 bits (1308), Expect = 2.610e-176 Identity = 265/317 (83.60%), Postives = 276/317 (87.07%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRL F E+ RC+GVEVER G QRA V+GE VVLCAGAIG+PHLLQLSGVGPAELLR+HGV LVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTL GKAGIGLEYLLKRSGPMSMAPSQLGAFTRS E HPNIQYHVQPLSLEAFGQPLH+YPAITASVCNLNPTSRGTVRLKSSDP QAPAISPNYLSTPED+KVAADSLRVTR IAEQPAF KYAPEEVKPG EYQ+DDEL RLAGDIGTTIFHPVGT RMGR DD +AVVDARLRVRGI+GLRVADA +M
Sbjct: 222 RDNLTLWHSTQVNRLCFN---------EEGGMPRCSGVEVERNGSAQRATVSGE-----VVLCAGAIGTPHLLQLSGVGPAELLRKHGVTLVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLWGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSSPEHAHPNIQYHVQPLSLEAFGQPLHAYPAITASVCNLNPTSRGTVRLKSSDPHQAPAISPNYLSTPEDRKVAADSLRVTRHIAEQPAFNKYAPEEVKPGAEYQSDDELARLAGDIGTTIFHPVGTARMGRKDDVMAVVDARLRVRGINGLRVADASIM 524
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A0D7UVA7_9GAMM (Choline dehydrogenase n=40 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7UVA7_9GAMM) HSP 1 Score: 494 bits (1273), Expect = 6.720e-171 Identity = 255/318 (80.19%), Postives = 275/318 (86.48%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLF-ERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRL F E QP TLRCTGVEV R GKPQR E VVLCAGAIGSPHLLQLSG+GPAE LREHG+E+VH+LPGVGENLQDHLQIRSVY+++N KTLNA+ASTL G+AGIG EY+ KR+GPMSMAPSQLGAFTRS +Q +PNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS+DPRQAPAISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKY PEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMG+ DD +AVVD +LRV G+ GLR+ADA VM
Sbjct: 227 RDNLTLWHSTQVNRLCFDEEQP----------TLRCTGVEVVRSGKPQRVQARKE-----VVLCAGAIGSPHLLQLSGIGPAEHLREHGIEVVHDLPGVGENLQDHLQIRSVYRVSNAKTLNAIASTLWGRAGIGWEYVTKRTGPMSMAPSQLGAFTRSSDDQPYPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSADPRQAPAISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYLPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGKRDDPMAVVDEKLRVLGVVGLRIADAGVM 529
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A1U9R5X0_9GAMM (Choline dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R5X0_9GAMM) HSP 1 Score: 491 bits (1263), Expect = 1.690e-169 Identity = 254/317 (80.13%), Postives = 269/317 (84.86%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVN+L FE++ DT RC VEV R G+P R E VVLCAGAIGSPHLL LSGVGPAE LREH + LVH+LPGVGENLQDHLQIRSVY+++N KTLN MASTLLGKA IG EYL KR+GPMSMAPSQLGAFTRS E THPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAP+ISPNYLSTPED+KVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDEL RLAGDIGTTIFHPVGTTRMGR DD +AVVDARLRVRG+ GLRVADA +M
Sbjct: 222 RDNLTLWHSTQVNQLCFEKEQ---------DTPRCCAVEVVRNGEPVRVSAQKE-----VVLCAGAIGSPHLLLLSGVGPAEHLREHNIALVHDLPGVGENLQDHLQIRSVYRVSNAKTLNVMASTLLGKAAIGWEYLTKRTGPMSMAPSQLGAFTRSSDEYTHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSCDPRQAPSISPNYLSTPEDRKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELARLAGDIGTTIFHPVGTTRMGRADDPMAVVDARLRVRGVKGLRVADAGIM 524
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: A0A7Z7MXZ2_9GAMM (Choline dehydrogenase n=1 Tax=Halomonas sp. hl-4 TaxID=1761789 RepID=A0A7Z7MXZ2_9GAMM) HSP 1 Score: 479 bits (1232), Expect = 9.060e-165 Identity = 247/317 (77.92%), Postives = 270/317 (85.17%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRL FE Q C+G+EV R+ K VN EVVLCAGAIGSPHLLQLSGVGPA+LLREH +++VH+LPGVGENLQDHLQIRSVY+++ KTLNAMASTL GKAGIG EYL KR+GPMSMAPSQLGAFTRS + +HPNI+YHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAPAISPNYLSTPED+KVAADSLRVTR+IAEQPAFAKY PEEVKPG+EYQ+DDEL RLAGDIGTTIFHPVGT RMGR+DD +AVVD++LRVRGISGLRVADA VM
Sbjct: 221 RGNLTLWHSTQVNRLCFEHNEGATQ---------CSGIEVVRDAKT--VQVNASR---EVVLCAGAIGSPHLLQLSGVGPADLLREHDIKVVHDLPGVGENLQDHLQIRSVYRVSKAKTLNAMASTLWGKAGIGWEYLTKRTGPMSMAPSQLGAFTRSSDDYSHPNIEYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSRDPRQAPAISPNYLSTPEDRKVAADSLRVTRKIAEQPAFAKYQPEEVKPGLEYQSDDELARLAGDIGTTIFHPVGTARMGREDDSMAVVDSQLRVRGISGLRVADASVM 523
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Match: UPI00201F7AB8 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F7AB8) HSP 1 Score: 470 bits (1210), Expect = 2.020e-161 Identity = 244/317 (76.97%), Postives = 267/317 (84.23%), Query Frame = 1
Query: 1 RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMVNGEEGGGEVVLCAGAIGSPHLLQLSGVGPAELLREHGVELVHELPGVGENLQDHLQIRSVYKITNGKTLNAMASTLLGKAGIGLEYLLKRSGPMSMAPSQLGAFTRSGAEQTHPNIQYHVQPLSLEAFGQPLHSYPAITASVCNLNPTSRGTVRLKSSDPRQAPAISPNYLSTPEDQKVAADSLRVTRRIAEQPAFAKYAPEEVKPGVEYQTDDELTRLAGDIGTTIFHPVGTTRMGRDDDELAVVDARLRVRGISGLRVADADVM 951
R NLTLWHS QVNRL E ++ LRC GVEV R GK +A E VVLCAGAIG+PHLL LSG+GPAE LREH +E++H+LPGVGENLQDHLQIRSVY+++N KTLNAMASTL+GK GIG EYL +R+GPMSMAPSQLGAFTRS E HPNIQYHVQPLSLEAFGQPLH YPAITASVCNLNPTSRGTVRLKS DPRQAP+ISPNYLSTPED+KVAADSLRVTRRIA QPAFAKYAPEEVKPG+EYQTD+EL LAGDIGTTIFHPVGTTRMG+ DD +AVVDA+LRVRG+ GLRVADA VM
Sbjct: 222 RDNLTLWHSTQVNRLHIE---------DENGVLRCGGVEVVRGGKVIKAKALKE-----VVLCAGAIGTPHLLLLSGIGPAEHLREHEIEVIHDLPGVGENLQDHLQIRSVYRVSNAKTLNAMASTLMGKVGIGWEYLTRRTGPMSMAPSQLGAFTRSADEYPHPNIQYHVQPLSLEAFGQPLHPYPAITASVCNLNPTSRGTVRLKSRDPRQAPSISPNYLSTPEDRKVAADSLRVTRRIAGQPAFAKYAPEEVKPGIEYQTDEELALLAGDIGTTIFHPVGTTRMGKVDDPMAVVDAKLRVRGVRGLRVADAGVM 524 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15541.3211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15541.3211.1 >prot_E-siliculosus-1a_F_contig15541.3211.1 ID=prot_E-siliculosus-1a_F_contig15541.3211.1|Name=mRNA_E-siliculosus-1a_F_contig15541.3211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=317bp RSNLTLWHSAQVNRLLFERQPFERQTVEQVDTLRCTGVEVEREGKPQRAMback to top mRNA from alignment at E-siliculosus-1a_F_contig15541:3..953+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15541.3211.1 ID=mRNA_E-siliculosus-1a_F_contig15541.3211.1|Name=mRNA_E-siliculosus-1a_F_contig15541.3211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=951bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15541:3..953+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15541:3..953+ >mRNA_E-siliculosus-1a_F_contig15541.3211.1 ID=mRNA_E-siliculosus-1a_F_contig15541.3211.1|Name=mRNA_E-siliculosus-1a_F_contig15541.3211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15541:3..953+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |