prot_E-siliculosus-1a_F_contig1554.3210.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1554.3210.1
Unique Nameprot_E-siliculosus-1a_F_contig1554.3210.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length209
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1554.3210.1 vs. uniprot
Match: A0A6H5KX33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX33_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 9.070e-121
Identity = 190/217 (87.56%), Postives = 191/217 (88.02%), Query Frame = 0 
Query:    1 MTTREPPSSISGLKTKYFQHVLDVSSTEPSLSSXXXXXXXXEAAVRWDQPTRRTESTCRATMMGCACCGDTKEAYPSDEDAPSRTHGLRTPPPVPSSSDALAKEALSILSQPEKDRIILLMHAKLRHLSHRAEDARSVSERKVCCLERAHRDALRERMLSEQRLREELRQWKHHHPE---------RLREEKDHSQRQYLAVLGKLARRQTLLKTSL 208
            MTTREPPS+ISGLKTKYFQHVLDVSSTEPSLSS        EAAVRWDQPTRRTE TCR TMMGC C GDTKEAYPSDEDAPS TH LRTPPPVPSSSDALAKEALSILSQ EKDRIILLMHAKLRHLSHRAEDARSVSERKVCCLERAHRDALRERMLSEQRLREELRQWKHHHPE         RLREEKDHSQRQYLAVLGKLARR TLLK SL
Sbjct:    1 MTTREPPSTISGLKTKYFQHVLDVSSTEPSLSSSSSS----EAAVRWDQPTRRTECTCRTTMMGCTCWGDTKEAYPSDEDAPSTTHVLRTPPPVPSSSDALAKEALSILSQAEKDRIILLMHAKLRHLSHRAEDARSVSERKVCCLERAHRDALRERMLSEQRLREELRQWKHHHPEVAELRLENQRLREEKDHSQRQYLAVLGKLARRHTLLKKSL 213
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BLAST of mRNA_E-siliculosus-1a_F_contig1554.3210.1 vs. uniprot
Match: D7G3C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C8_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 5.080e-48
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0 
Query:  121 MHAKLRHLSHRAEDARSVSERKVCCLERAHRDALRERMLSEQRLREELRQWKHHHPERLREEKDHSQRQYLAVLGKLARRQTLLKTSL 208
            MHAKLRHLSHRAEDARSVSERK CCLERAHRDALRERMLSEQRLREELRQWKHHHPERLREEKDHSQRQYLAVLGKLARR T LKTSL
Sbjct:    1 MHAKLRHLSHRAEDARSVSERKACCLERAHRDALRERMLSEQRLREELRQWKHHHPERLREEKDHSQRQYLAVLGKLARRHTWLKTSL 88
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1554.3210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX33_9PHAE9.070e-12187.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3C8_ECTSI5.080e-4896.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1554contigE-siliculosus-1a_F_contig1554:26614..28764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1554.3210.1mRNA_E-siliculosus-1a_F_contig1554.3210.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1554 26614..28764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1554.3210.1 ID=prot_E-siliculosus-1a_F_contig1554.3210.1|Name=mRNA_E-siliculosus-1a_F_contig1554.3210.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=209bp
MTTREPPSSISGLKTKYFQHVLDVSSTEPSLSSSSSSSSSSEAAVRWDQP
TRRTESTCRATMMGCACCGDTKEAYPSDEDAPSRTHGLRTPPPVPSSSDA
LAKEALSILSQPEKDRIILLMHAKLRHLSHRAEDARSVSERKVCCLERAH
RDALRERMLSEQRLREELRQWKHHHPERLREEKDHSQRQYLAVLGKLARR
QTLLKTSL*
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