prot_E-siliculosus-1a_F_contig1552.3197.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1552.3197.1
Unique Name	prot_E-siliculosus-1a_F_contig1552.3197.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	412

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1552.3197.1 vs. uniprot
Match: A0A6H5KAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR2_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 5.320e-196
Identity = 380/564 (67.38%), Postives = 386/564 (68.44%), Query Frame = 0

Query:    1 MSRGSEKAALSSAVGMQRSRWCDRSARGARRTRAWVPGLAASXXXXXXXXXXXXXXXXXXXXENVDWEKIKPEPGQEPXXXXXXXXGKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLNKEMGDEWLANKLQSALRKSQNRNVQSNVNKAYINEWLDDEKEKLEETAEDLKEAYRKDAERIKKKMMEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELG-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGEDATKGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPGESTAEQGVIRVAKAKGVSFTTVRVSKLLAEDRGAIDPMPLIVPRNTPRADGGRSTLPAASRSVAANTIFRASYQ 403
            MSRGSEKA LSSAVGMQRSRWCDRS  GARRTRAWVPGLAASXXXXXXXXXXXXXXXXXXXX NV+W KIKPEPGQEP        GKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDL+KEMGDEWLANKLQSALRKSQNRNVQSNVNKAYI EWLD+EKEKL+ETAEDLKEAYRKDAERIKK+MMEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELG                                                                                                                                                                 GGG EDATKGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFP ESTAEQ VIRVAKAKGVSFTTVRVSKLLAEDRGAIDPMPLIVPRN+PRADGGRSTLPAASRSVAANTIFRASYQ
Sbjct:   71 MSRGSEKAVLSSAVGMQRSRWCDRSTGGARRTRAWVPGLAASXXXXXXXXXXXXXXXXXXXXXNVNWGKIKPEPGQEPDWDKILPKGKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLSKEMGDEWLANKLQSALRKSQNRNVQSNVNKAYIKEWLDEEKEKLDETAEDLKEAYRKDAERIKKRMMEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELGVAPPSSEGSPDTVTLEERNQMEAEMRTLSPADVIKQASAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAGDGEDGPLGAAVLALFEEEVAGVGEKGAARVSSVSGVPLSAAKGLGGEGGGDGDVRAALEGVKTLVIVPGDPGSKKKKGGVXXXXXXXXXGGGAEDATKGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPAESTAEQAVIRVAKAKGVSFTTVRVSKLLAEDRGAIDPMPLIVPRNSPRADGGRSTLPAASRSVAANTIFRASYQ 634

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BLAST of mRNA_E-siliculosus-1a_F_contig1552.3197.1 vs. uniprot
Match: D7FK21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK21_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 2.670e-184
Identity = 304/330 (92.12%), Postives = 309/330 (93.64%), Query Frame = 0

Query:   63 ENVDWEKIKPEPGQEPXXXXXXXXGKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLNKEMGDEWLANKLQSALRKSQNRNVQSNVNKAYINEWLDDEKEKLEETAEDLKEAYRKDAERIKKKMMEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELGGGGGEDATKGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPGESTAEQGVIRVAKAKGVSFTTVRVSKLLAEDRGAIDPMPLIVPRNTPRADGGRSTLPAASRSV 392
            ENVD  KIKPEPGQEP        GKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLNKEMGDEWLANKLQSALRKSQNRNVQSNVNKAYINEWLD+EKEKL+ETAEDLKEAYRKDAERIKKKMMEEFDKEARVMDIKVANIIARG+SNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELGGGGGEDA KGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPGESTAEQGVI VAKAKG SFTTVRVSKLL +DRGAIDPMPLIVPRN PRADG R   P AS +V
Sbjct:   46 ENVDGGKIKPEPGQEPDWDKILPKGKEAPEMPPAPPGLSKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLNKEMGDEWLANKLQSALRKSQNRNVQSNVNKAYINEWLDEEKEKLDETAEDLKEAYRKDAERIKKKMMEEFDKEARVMDIKVANIIARGRSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELGGGGGEDAAKGEGLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPGESTAEQGVIPVAKAKGGSFTTVRVSKLLGQDRGAIDPMPLIVPRNIPRADG-RQVYPPASVAV 374

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1552.3197.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1552.3197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KAR2_9PHAE	5.320e-196	67.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FK21_ECTSI	2.670e-184	92.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 171..202
None	No IPR available	COILS	Coil	Coil	coord: 123..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1552	contig	E-siliculosus-1a_F_contig1552:13257..20487 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1552.3197.1	mRNA_E-siliculosus-1a_F_contig1552.3197.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1552 12996..23883 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1552.3197.1 ID=prot_E-siliculosus-1a_F_contig1552.3197.1|Name=mRNA_E-siliculosus-1a_F_contig1552.3197.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=412bp
MSRGSEKAALSSAVGMQRSRWCDRSARGARRTRAWVPGLAASSDDDDDNG
GKKNSSGGGDDDENVDWEKIKPEPGQEPDWDKILPKGKEAPEMPPAPPGL
SKLDPRERLTAYAGMLDWEPMDLDEEEEKEKTYEDLNKEMGDEWLANKLQ
SALRKSQNRNVQSNVNKAYINEWLDDEKEKLEETAEDLKEAYRKDAERIK
KKMMEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEF
AYLAEDEAAFYEELGGGGGEDATKGEGLSDEEVVGLLDACGKSLKHVVCL
SVGGASSGGGGGGLFGGGGGGAEDKGFPGESTAEQGVIRVAKAKGVSFTT
VRVSKLLAEDRGAIDPMPLIVPRNTPRADGGRSTLPAASRSVAANTIFRA
SYQRFLRFLFQ*