prot_E-siliculosus-1a_F_contig1541.3140.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1541.3140.1
Unique Nameprot_E-siliculosus-1a_F_contig1541.3140.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length158
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1541.3140.1 vs. uniprot
Match: A0A6H5JDE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE9_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.360e-68
Identity = 117/139 (84.17%), Postives = 124/139 (89.21%), Query Frame = 0 
Query:    1 MFRGRGGIKYAMFNDSHLLHNKVVNGDLLGAQ-ELVNAGVSVNGNPRLLRDIPLILATVKGRIRIAEFLIARGANLESACLEDVVNENNGEMSARKGTRALHLSSSPDMTSVLLKAGACPNATDADGCTPLMRAVENPK 138
            MFRGRGGIKYA FND+ LLH KVVNGDLLG + ELVNAGVSVNGNPRLLRDI LIL TVKG IRIAEFLIARGANLESACLEDVVNE  GEMS RKGTRALHLSSSP++TSVLLKAGACP+ATDADGCTPLM   ++ K
Sbjct:    1 MFRGRGGIKYATFNDAQLLH-KVVNGDLLGVKKELVNAGVSVNGNPRLLRDITLILTTVKGHIRIAEFLIARGANLESACLEDVVNEI-GEMSVRKGTRALHLSSSPEITSVLLKAGACPDATDADGCTPLMLTTKDGK 137
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BLAST of mRNA_E-siliculosus-1a_F_contig1541.3140.1 vs. uniprot
Match: D8LEI1_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI1_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.700e-60
Identity = 106/121 (87.60%), Postives = 110/121 (90.91%), Query Frame = 0 
Query:   12 MFNDSHLLHNKVVNGDLLGAQELVNAGVSVNGNPRLLRDIPLILATVKGRIRIAEFLIARGANLESACLEDVVNENNGEMSARKGTRALHLSSSPDMTSVLLKAGACPNATDADGCTPLMR 132
            MFNDS LLH KVVNGDL G QELVNAGVSVNGN R LRDIPLILATV+G IRIA+FLIARGANLESACLEDV NEN GEMSARKGTRALHLSSSP+MTSVLLKAGAC NATDADGCT L+R
Sbjct:    1 MFNDSQLLH-KVVNGDLPGVQELVNAGVSVNGNLRPLRDIPLILATVEGHIRIAKFLIARGANLESACLEDVGNEN-GEMSARKGTRALHLSSSPEMTSVLLKAGACLNATDADGCTSLVR 119
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BLAST of mRNA_E-siliculosus-1a_F_contig1541.3140.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 5.010e-10
Identity = 55/140 (39.29%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:   22 KVVNGDLLGAQELVNAGVSVNGNPRLLRDI--PLILATVKGRIRIAEFLIARGANLESACLEDVVNENNGEMSARKGTRALHLS---SSPDMTSVLLKAGACPNATDADGCTPLMRAVENPKAL-AVGMVRELLRGNADP 155
            +V+ G+  G +E ++ G S++G      DI  PL  A   GR  +   L  RGA LE+ C  DV  ++ G      G+ A+H +      D    LL AGA PNA DA G TPLM+A     A     +VRELLRG ADP
Sbjct:   12 EVLKGNERGVEEQLDLGASLDGF-----DIWKPLFAAARHGRAGVVTLLAKRGAELEATCPRDV-RDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADP 145
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BLAST of mRNA_E-siliculosus-1a_F_contig1541.3140.1 vs. uniprot
Match: D8LME9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 8.630e-8
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   54 ILATVKGRIRIAEFLIARGANLESACLEDVVNENNGEMSARKGTRALHLS---SSPDMTSVLLKAGACPNATDADGCTPLM 131
            ++A   G++   EFL+ARGA L+S    DV     G +  R G++A+H +    SP +  VLL+ GA PNA D DG TPLM
Sbjct:    1 MVAAGLGKVSFVEFLVARGAGLDSRTCRDVPRPEGGII-LRMGSQAIHAAVHGGSPGVLYVLLRLGANPNAADDDGETPLM 80
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JDE9_9PHAE3.360e-6884.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEI1_ECTSI2.700e-6087.60Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JAW5_9PHAE5.010e-1039.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LME9_ECTSI8.630e-843.21Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 95..121
e-value: 4200.0
score: 0.3
coord: 125..157
e-value: 0.39
score: 19.8
coord: 48..77
e-value: 11.0
score: 15.0
coord: 14..43
e-value: 4300.0
score: 0.3
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 99..123
e-value: 0.0036
score: 17.7
coord: 125..155
e-value: 0.0018
score: 18.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 13..158
e-value: 3.2E-19
score: 71.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 14..156
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 91..155
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 91..155
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 14..158
score: 17.449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1541contigE-siliculosus-1a_F_contig1541:12249..12722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1541.3140.1mRNA_E-siliculosus-1a_F_contig1541.3140.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1541 12249..13602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1541.3140.1 ID=prot_E-siliculosus-1a_F_contig1541.3140.1|Name=mRNA_E-siliculosus-1a_F_contig1541.3140.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=158bp
MFRGRGGIKYAMFNDSHLLHNKVVNGDLLGAQELVNAGVSVNGNPRLLRD
IPLILATVKGRIRIAEFLIARGANLESACLEDVVNENNGEMSARKGTRAL
HLSSSPDMTSVLLKAGACPNATDADGCTPLMRAVENPKALAVGMVRELLR
GNADPRLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt