prot_E-siliculosus-1a_F_contig1541.3139.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1541.3139.1
Unique Nameprot_E-siliculosus-1a_F_contig1541.3139.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length49
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.080e-17
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    7 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP
Sbjct:   75 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 113          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A0B1S663_OESDE (CAF1C_H4-bd domain-containing protein n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1S663_OESDE)

HSP 1 Score: 72.0 bits (175), Expect = 1.560e-15
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 HNNSNDVSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            H +SN V A++   EEK+I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   13 HEDSNMVEASDGSMEEKVINEEYKIWKKNTPFLYDMVMTHALEWP 57          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A2P4YCE2_9STRA (Histone-binding protein RBBP4 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCE2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.540e-14
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    6 DVSAANEEA-EEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            DV+AAN+ A +EK+I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   22 DVAAANDAALQEKLINEEYKIWKKNTPFLYDLVMTHALEWP 62          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A673T3Y0_SURSU (CAF1C_H4-bd domain-containing protein n=1 Tax=Suricata suricatta TaxID=37032 RepID=A0A673T3Y0_SURSU)

HSP 1 Score: 67.4 bits (163), Expect = 1.000e-13
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    6 DVSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            D  AA ++AEE++I EEYK+WKKNTPFLY +VMTHALEWP
Sbjct:   17 DKEAAFDDAEERVINEEYKIWKKNTPFLYHLVMTHALEWP 56          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A8D2MWC2_ZONAL (CAF1C_H4-bd domain-containing protein n=1 Tax=Zonotrichia albicollis TaxID=44394 RepID=A0A8D2MWC2_ZONAL)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-13
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    7 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            ++A ++  EE++I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   12 IAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWP 50          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A3P7IJ28_STRVU (CAF1C_H4-bd domain-containing protein n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7IJ28_STRVU)

HSP 1 Score: 67.8 bits (164), Expect = 1.270e-13
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    7 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            V A++   EEK+I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   19 VEASDGSMEEKVINEEYKIWKKNTPFLYDMVMTHALEWP 57          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A667X9F6_9TELE (Histone-binding protein RBBP4-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667X9F6_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 2.250e-13
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    7 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
             SA ++  EE++I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   12 ASAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWP 50          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A1S0UFZ1_LOALO (CAF1C_H4-bd domain-containing protein n=2 Tax=Onchocercidae TaxID=6296 RepID=A0A1S0UFZ1_LOALO)

HSP 1 Score: 65.9 bits (159), Expect = 2.640e-13
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:   10 ANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            A E  EE++I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:    2 AEEGYEERLINEEYKIWKKNTPFLYDMVMTHALEWP 37          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A669BZA1_ORENI (CAF1C_H4-bd domain-containing protein n=17 Tax=Euteleostomi TaxID=117571 RepID=A0A669BZA1_ORENI)

HSP 1 Score: 65.9 bits (159), Expect = 3.790e-13
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    6 DVSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            +  A ++  EE++I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:    5 EAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWP 44          
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Match: A0A0B1SYT1_OESDE (CAF1C_H4-bd domain-containing protein n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1SYT1_OESDE)

HSP 1 Score: 69.3 bits (168), Expect = 4.060e-13
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    4 SNDVSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWP 45
            SN V A++   EEK+I EEYK+WKKNTPFLYD+VMTHALEWP
Sbjct:   47 SNMVEASDGSMEEKVINEEYKIWKKNTPFLYDMVMTHALEWP 88          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1541.3139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAT4_9PHAE1.080e-17100.00CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A0B1S663_OESDE1.560e-1571.11CAF1C_H4-bd domain-containing protein n=1 Tax=Oeso... [more]
A0A2P4YCE2_9STRA7.540e-1478.05Histone-binding protein RBBP4 n=1 Tax=Phytophthora... [more]
A0A673T3Y0_SURSU1.000e-1372.50CAF1C_H4-bd domain-containing protein n=1 Tax=Suri... [more]
A0A8D2MWC2_ZONAL1.170e-1369.23CAF1C_H4-bd domain-containing protein n=1 Tax=Zono... [more]
A0A3P7IJ28_STRVU1.270e-1374.36CAF1C_H4-bd domain-containing protein n=1 Tax=Stro... [more]
A0A667X9F6_9TELE2.250e-1371.79Histone-binding protein RBBP4-like n=1 Tax=Myripri... [more]
A0A1S0UFZ1_LOALO2.640e-1377.78CAF1C_H4-bd domain-containing protein n=2 Tax=Onch... [more]
A0A669BZA1_ORENI3.790e-1367.50CAF1C_H4-bd domain-containing protein n=17 Tax=Eut... [more]
A0A0B1SYT1_OESDE4.060e-1373.81CAF1C_H4-bd domain-containing protein n=1 Tax=Oeso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..48
e-value: 9.1E-11
score: 43.4
IPR022052Histone-binding protein RBBP4, N-terminalPFAMPF12265CAF1C_H4-bdcoord: 21..45
e-value: 3.9E-11
score: 43.0
NoneNo IPR availablePANTHERPTHR22850:SF192coord: 5..46
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 5..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1541contigE-siliculosus-1a_F_contig1541:6260..6406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1541.3139.1mRNA_E-siliculosus-1a_F_contig1541.3139.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1541 6260..6406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1541.3139.1 ID=prot_E-siliculosus-1a_F_contig1541.3139.1|Name=mRNA_E-siliculosus-1a_F_contig1541.3139.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=49bp
HNNSNDVSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWPRCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022052Histone-bd_RBBP4_N
IPR015943WD40/YVTN_repeat-like_dom_sf