prot_E-siliculosus-1a_F_contig1540.3131.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1540.3131.1
Unique Nameprot_E-siliculosus-1a_F_contig1540.3131.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length308
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1540.3131.1 vs. uniprot
Match: D8LAT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAT0_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 1.430e-140
Identity = 254/308 (82.47%), Postives = 255/308 (82.79%), Query Frame = 0 
Query:    1 MPPEPELAHPSFSRRASNTSAASSSSXXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQTRRSGSSRSFHHKRTASRGSNHDLITPTSHGRPGLGASQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGVDAAEPSERRXXXXXXXXMGQGEGQSIVAAAMANFEGGVGATPGAIPEEGRDLSRSFQGSYSADPGDDAAAAEAAVGRPAXXXXXXXGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPT 308
            MPPEPELAHPSFSRRASNTSAASSS XXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQT                                    SQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGVD AEPSERR        M QGEGQSIVAAAMANF GGV A PGAIPEEGR LSRSFQGS SADPGDD+AAAEAAVGRPAXXXXXX GEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPT
Sbjct:    1 MPPEPELAHPSFSRRASNTSAASSSXXXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQT------------------------------------SQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGVDTAEPSERRRRRHRKSSMAQGEGQSIVAAAMANFGGGVDANPGAIPEEGRVLSRSFQGSDSADPGDDSAAAEAAVGRPAXXXXXXGGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSPT 272
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAT0_ECTSI1.430e-14082.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 268..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1540contigE-siliculosus-1a_F_contig1540:535..3486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1540.3131.1mRNA_E-siliculosus-1a_F_contig1540.3131.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1540 535..3486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1540.3131.1 ID=prot_E-siliculosus-1a_F_contig1540.3131.1|Name=mRNA_E-siliculosus-1a_F_contig1540.3131.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=308bp
MPPEPELAHPSFSRRASNTSAASSSSRTSSAEKAHAKSLRNAGKEAFLTV
VRETVQELGLDAANEAIEEEAIRMEEMQTRRSGSSRSFHHKRTASRGSNH
DLITPTSHGRPGLGASQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGV
DAAEPSERRRRRHRKSSMGQGEGQSIVAAAMANFEGGVGATPGAIPEEGR
DLSRSFQGSYSADPGDDAAAAEAAVGRPAAAAADGGGEATSFRNTAETME
DDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQ
AMPNPSPT
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