prot_E-siliculosus-1a_F_contig154.3129.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig154.3129.1
Unique Name	prot_E-siliculosus-1a_F_contig154.3129.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	851

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Match: D8LSX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX4_ECTSI)

HSP 1 Score: 1203 bits (3112), Expect = 0.000e+0
Identity = 633/716 (88.41%), Postives = 642/716 (89.66%), Query Frame = 0

Query:  135 MFPKREAIQQLKDRLKAWCAEENRREQEGVSLPGGTSREDRAPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRPVNDTRLEVTVDFETEDEAREVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRHYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPSGAMVPLVAIGGAEDGVSPPTMVVLEGLKLGVRHFVLEVDSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIEPDGTATRLLDSVDALVLARESGEYFDDDRQFLEMWDEAHQAAASPPRESTALPAVPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDGSSYDENSVVGESSPFDIPADSLAAESSSSXXXDGSNDELDSRLGSHLGVGGHGPKVADRLALLVDHSPAAAPPAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVKQVARVLPLARYYLPPEWMTEIADRGGCLPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGAGDSYDGLWGMDDDE 850
            MFPKREA+QQLKDRL+AWCAEENRREQE VSLPGGTSREDR PRRWQAYEFIPLPSRNRTLDSEVLGMNVGR VNDTRLEVTVDFE EDEA EVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHR+YDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLP+GA+VPLVAIGGAEDGVSPPTM+VLEGLKLGVRHFVLEV SSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIE DGTATRLLDSVDALVLARESGEYFDDDR FLEMWDEAHQAAASPPREST LPAVPTEQT LDTP DDDPFGS                                          XXX             HLGVGGHG KVADRLALLVD SPAA   AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLE AGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVK+VARVLPLARYYLPPEW++EIADRGGC PEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADG GDSYDGLWGMDDDE
Sbjct:    1 MFPKREAVQQLKDRLQAWCAEENRREQEDVSLPGGTSREDRPPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRSVNDTRLEVTVDFEKEDEALEVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRNYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGAIVPLVAIGGAEDGVSPPTMIVLEGLKLGVRHFVLEVGSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIETDGTATRLLDSVDALVLARESGEYFDDDRLFLEMWDEAHQAAASPPRESTGLPAVPTEQTGLDTPADDDPFGSXX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGVGGHGSKVADRLALLVDQSPAAGAAAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLECAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEWISEIADRGGCPPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLWGMDDDE 697

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BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Match: A0A6H5L373_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L373_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 2.030e-94
Identity = 170/215 (79.07%), Postives = 176/215 (81.86%), Query Frame = 0

Query:  531 YFDDDRQFLEMWDEAHQAAASPPRESTALPAVPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDGSSYDENSVVGESSPFDIPADSLAAESSSSXXXD-------GSNDELDSRLGSHLGVGGHGPKVADRLALLVDHSPAAAPPAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEARKGAAAAADYEHEDVT 738
            YFDDDRQFLEMWDEAH AAAS PREST LPA PTEQTDLDTPVDD+PF             DGSS D+NSVVGE  PFD PADSL A+S ++           GSNDELDSRLGSHLGVGGHGPKVADRLALLVD SPAA   AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEA KGAAAAADYEHEDV+
Sbjct:    4 YFDDDRQFLEMWDEAHHAAASLPRESTGLPAAPTEQTDLDTPVDDNPFXXXXXXXXXXXXXDGSSSDDNSVVGEGRPFDFPADSLTADSPAAESSXXXXXXXXGSNDELDSRLGSHLGVGGHGPKVADRLALLVDQSPAAGS-AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVS 217

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LSX4_ECTSI	0.000e+0	88.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L373_9PHAE	2.030e-94	79.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..162
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 34..41
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..41
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 23..33
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..850

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig154	contig	E-siliculosus-1a_F_contig154:59081..70904 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig154.3129.1	mRNA_E-siliculosus-1a_F_contig154.3129.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig154 59081..71886 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig154.3129.1 ID=prot_E-siliculosus-1a_F_contig154.3129.1|Name=mRNA_E-siliculosus-1a_F_contig154.3129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=851bp
MKHPRAARNTAVGVMNCCCRRPFTATIVALLFLSDAPLVCSFFSPVATAT
ASCSGSRFWAAAGGGQDQHALRPAGPRAARCRQSRVRGRVTMERPSGQFN
RLAKPAFDRDNPNAVLGEVKVPGLEQVCMVAQTQMFPKREAIQQLKDRLK
AWCAEENRREQEGVSLPGGTSREDRAPRRWQAYEFIPLPSRNRTLDSEVL
GMNVGRPVNDTRLEVTVDFETEDEAREVGMRLLDMMADVSREPNEVFGYA
DDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANW
ADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIA
ETFASSDAMLDHFHRHYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLS
ATLPSGAMVPLVAIGGAEDGVSPPTMVVLEGLKLGVRHFVLEVDSSGVKE
AVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGR
VDDGGIEPDGTATRLLDSVDALVLARESGEYFDDDRQFLEMWDEAHQAAA
SPPRESTALPAVPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDGSSYDENS
VVGESSPFDIPADSLAAESSSSSSADGSNDELDSRLGSHLGVGGHGPKVA
DRLALLVDHSPAAAPPAADVPGTVPRKLPSLYFGDLRAGDGAATTATIEL
CRERGVQAFSLEYAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEI
DGGVVWRPREVKQVARVLPLARYYLPPEWMTEIADRGGCLPEAWARTLSR
LCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGAGDSYDGLWGMDDDE
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