mRNA_E-siliculosus-1a_F_contig154.3129.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Match: D8LSX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX4_ECTSI) HSP 1 Score: 1204 bits (3115), Expect = 0.000e+0 Identity = 633/716 (88.41%), Postives = 642/716 (89.66%), Query Frame = 1
Query: 403 MFPKREAIQQLKDRLKAWCAEENRREQEGVSLPGGTSREDRAPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRPVNDTRLEVTVDFETEDEAREVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRHYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPSGAMVPLVAIGGAEDGVSPPTMVVLEGLKLGVRHFVLEVDSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIEPDGTATRLLDSVDALVLARESGEYFDDDRQFLEMWDEAHQAAASPPRESTALPAVPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDGSSYDENSVVGESSPFDIPADSLAAESSSSXXXDGSNDELDSRLGSHLGVGGHGPKVADRLALLVDHSPAAAPPAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVKQVARVLPLARYYLPPEWMTEIADRGGCLPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGAGDSYDGLWGMDDDE 2550
MFPKREA+QQLKDRL+AWCAEENRREQE VSLPGGTSREDR PRRWQAYEFIPLPSRNRTLDSEVLGMNVGR VNDTRLEVTVDFE EDEA EVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHR+YDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLP+GA+VPLVAIGGAEDGVSPPTM+VLEGLKLGVRHFVLEV SSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIE DGTATRLLDSVDALVLARESGEYFDDDR FLEMWDEAHQAAASPPREST LPAVPTEQT LDTP DDDPFGS XXX HLGVGGHG KVADRLALLVD SPAA AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLE AGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVK+VARVLPLARYYLPPEW++EIADRGGC PEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADG GDSYDGLWGMDDDE
Sbjct: 1 MFPKREAVQQLKDRLQAWCAEENRREQEDVSLPGGTSREDRPPRRWQAYEFIPLPSRNRTLDSEVLGMNVGRSVNDTRLEVTVDFEKEDEALEVGMRLLDMMADVSREPNEVFGYADDAVTGGQQLGPWKKSGSVNSWRKWLELGDGEDPLPESAVTVFRTVQANWADPNKIAAAMNFTVFWSNARMEESMADPTTPLRRVEVLHSALHPHVIKIAETFASSDAMLDHFHRNYDGYLSGVFNFRAAVNPTVQAYTPLEASLRPCLSATLPTGAIVPLVAIGGAEDGVSPPTMIVLEGLKLGVRHFVLEVGSSGVKEAVEGLQAALAFGVVKRDHLFVTMIVGESNSAVAGGRGIAAAVSETLASGRVDDGGIETDGTATRLLDSVDALVLARESGEYFDDDRLFLEMWDEAHQAAASPPRESTGLPAVPTEQTGLDTPADDDPFGSXX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGVGGHGSKVADRLALLVDQSPAAGAAAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLECAGGRGAEEARKGAAAAADYEHEDVTDDEVLAKWVMEIDGGVVWRPREVKEVARVLPLARYYLPPEWISEIADRGGCPPEAWARTLSRLCPSEGTPSEEQLGAEVEETVAGLMTPDDGEEADGVGDSYDGLWGMDDDE 697
BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Match: A0A6H5L373_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L373_9PHAE) HSP 1 Score: 304 bits (779), Expect = 3.260e-92 Identity = 170/215 (79.07%), Postives = 176/215 (81.86%), Query Frame = 1
Query: 1591 YFDDDRQFLEMWDEAHQAAASPPRESTALPAVPTEQTDLDTPVDDDPFGSPFDSGSPGGSFDGSSYDENSVVGESSPFDIPADSLAAESSSSXXXD-------GSNDELDSRLGSHLGVGGHGPKVADRLALLVDHSPAAAPPAADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEARKGAAAAADYEHEDVT 2214
YFDDDRQFLEMWDEAH AAAS PREST LPA PTEQTDLDTPVDD+PF DGSS D+NSVVGE PFD PADSL A+S ++ GSNDELDSRLGSHLGVGGHGPKVADRLALLVD SPAA AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEA KGAAAAADYEHEDV+
Sbjct: 4 YFDDDRQFLEMWDEAHHAAASLPRESTGLPAAPTEQTDLDTPVDDNPFXXXXXXXXXXXXXDGSSSDDNSVVGEGRPFDFPADSLTADSPAAESSXXXXXXXXGSNDELDSRLGSHLGVGGHGPKVADRLALLVDQSPAAGS-AADVPGTVPRKLPSLYFGDLRAGDGAATTATIELCRERGVQAFSLEYAGGRGAEEAGKGAAAAADYEHEDVS 217 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig154.3129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig154.3129.1 >prot_E-siliculosus-1a_F_contig154.3129.1 ID=prot_E-siliculosus-1a_F_contig154.3129.1|Name=mRNA_E-siliculosus-1a_F_contig154.3129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=851bp MKHPRAARNTAVGVMNCCCRRPFTATIVALLFLSDAPLVCSFFSPVATATback to top mRNA from alignment at E-siliculosus-1a_F_contig154:59081..71886+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig154.3129.1 ID=mRNA_E-siliculosus-1a_F_contig154.3129.1|Name=mRNA_E-siliculosus-1a_F_contig154.3129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=12806bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig154:59081..71886+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig154:59081..71886+ >mRNA_E-siliculosus-1a_F_contig154.3129.1 ID=mRNA_E-siliculosus-1a_F_contig154.3129.1|Name=mRNA_E-siliculosus-1a_F_contig154.3129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5106bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig154:59081..71886+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |