prot_E-siliculosus-1a_F_contig1539.3117.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1539.3117.1
Unique Nameprot_E-siliculosus-1a_F_contig1539.3117.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length413
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1539.3117.1 vs. uniprot
Match: D8LJV2_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV2_ECTSI)

HSP 1 Score: 725 bits (1872), Expect = 1.210e-262
Identity = 393/412 (95.39%), Postives = 399/412 (96.84%), Query Frame = 0
Query:    1 MQLRRNTVMAAVRLVQPLVKASNARGLASCPLRVHSSSGTSPKASASCAAVQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDVSEFFAVCIEFAPPPTSELKXXXXXXXXXXXXXXXXXXXXXXXAAPGLEGGAADLTAAGRGGGIGEKVRHGDFGSGDGKEGRWRACLAESGKVYYWHTVSREVTWDRPTGAEAYVPSVMPKTDQTLTAAA 412
            MQLRRNTV+AAVRLV+PLVKASNARGLASCPLRVH+S GTSPKASASCAAVQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQ+DHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVD SEFFAVCIEFAPPPT+ELK  XXXXXXXXXXXXXXXX     AAPGLEGGAAD TAAGRGGGIGEKV HGDFGSGDG+EGRWRACLAESGKVYYWHTVSREVTWDRP GAEAYVPSVMPK DQTLTAAA
Sbjct:    1 MQLRRNTVVAAVRLVRPLVKASNARGLASCPLRVHNS-GTSPKASASCAAVQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQFDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDASEFFAVCIEFAPPPTAELKAAXXXXXXXXXXXXXXXXGTVA-AAPGLEGGAADSTAAGRGGGIGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRPAGAEAYVPSVMPKADQTLTAAA 410          
BLAST of mRNA_E-siliculosus-1a_F_contig1539.3117.1 vs. uniprot
Match: A0A484DVK9_BRELC (WW domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVK9_BRELC)

HSP 1 Score: 96.7 bits (239), Expect = 2.240e-19
Identity = 69/277 (24.91%), Postives = 120/277 (43.32%), Query Frame = 0
Query:  116 IMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDVSEFFAVCIEFAPPPTSELKXXXXXXXXXXXXXXXXXXXXXXXAAPGLEGGAADLTAAGRGGGIGEKVRHGDFGSGDGKEGRWRACLAESGKVYYWHTVSREVTWDRPTG 392
            ++G  +  +     S+ + Q+C+N+    ++Y    +   F  +   L  +VWL+ RRL  EGE+GK +QEL+FD LW ET  ++R + +SE+ + KYLA+ QQ  F   + YD     +  +E      +A+ + +  ++ +       ++AE++  EL ++  VD        I + P P +  K                                 D+   G+                  + G WR+ L   GK+Y+W+  +R   WDRPTG
Sbjct:    1 MLGFLNEDDRLFRHSSAVFQSCMNHTAQPDYYRALGLPQSFRAQQAILMAHVWLVHRRLALEGEKGKIMQELVFDRLWEETVVRIRYLNISELTVNKYLAQVQQICFNACIAYD-----KGLKEGPRYFQTAVAQHLLENESTEGLRIASIMAEHMKRELKNLEKVDAKYIMLGTIPWTPLPETHAKIRPTDVD--------------------------DVVLIGQ------------------RFGNWRSALDNRGKLYFWNITTRYSIWDRPTG 228          
BLAST of mRNA_E-siliculosus-1a_F_contig1539.3117.1 vs. uniprot
Match: F0WM81_9STRA (Uncharacterized protein AlNc14C153G7585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM81_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.100e-18
Identity = 74/282 (26.24%), Postives = 119/282 (42.20%), Query Frame = 0
Query:  112 WPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIK--EPHVRVLAEYVDAELADIYAVDVSEFFAVCIEFAPPP-TSELKXXXXXXXXXXXXXXXXXXXXXXXAAPGLEGGAADLTAAGRGGGIGEKVRHGDFGSGDGKEGRWRACLAESGKVYYWHTVSREVTWDRP 390
            W + ++G  +  +     S ++LQ+C+N +   E Y   ++  +F  +   L  +VWL+ RRL +EG+ G+ +QEL+FD LW ET  ++R  +VSE+ + KYL + QQ  F   V YD     +  E       +A+   +   D+S    E HVR   EY+   +  +  +D        I +A  P  S+LK                                 D+   G+                  K G+WR  L   G++YYW++ SR   W  P
Sbjct:   49 WLFNLLGYNNQDDKMYRESTKVLQSCVNQSAVPELYQAIRLRPDFRGQQALLMVHVWLIHRRLAKEGDAGRVLQELVFDRLWEETVLRIRHQQVSELTVNKYLKQVQQVCFNACVAYD-----KGLERSKTDFNTAIRCHLLAQDDSHSPDEDHVRATYEYIQQNMQMLEKLDEKYLMKGVIPWAQAPKVSDLKQI-------------------------------DIVLIGQ------------------KFGKWRTALDIRGQMYYWNSESRLSAWKLP 276          
BLAST of mRNA_E-siliculosus-1a_F_contig1539.3117.1 vs. uniprot
Match: A0A024GN83_9STRA (WW domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN83_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.670e-13
Identity = 67/282 (23.76%), Postives = 117/282 (41.49%), Query Frame = 0
Query:  112 WPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEP---HVRVLAEYVDAELADIYAVDVSEFFAVCIEFAPPPTSELKXXXXXXXXXXXXXXXXXXXXXXXAAPGLEGGAADLTAAGRGGGIGEKVRHGDFGSGDGKEGRWRACLAESGKVYYWHTVSREVTWDRP 390
            W + ++G  +  +     S ++LQ+C+N +     Y   ++  +F  +   L  +VWL+ RRL ++GE G+ +QE +FD LW ET  ++R  +VSE+ + KYL + QQ  F   + YD        E   D   +A+ R   ++++ +  P   +V++ + Y+   +  +  +D        I +   P                               G +    D+   G+                  K G WR  L   GK+YYWH+ SR   W+ P
Sbjct:   70 WLFNLLGYNNNDDKLYRESVKLLQSCVNQSAVPNLYHAIRLRPDFRGQQALLMAHVWLVHRRLGKQGEAGRVLQEGVFDRLWEETVSRIRHQKVSELTVNKYLKQVQQVCFNACIAYDTGL-----ERSKDDFNTAI-RCHLLAEDDLHVPDEQYVQMTSTYLWQNMKMLDKLDERYLMKGVIPWDHVPD----------------------------IAGFK--QLDVVLIGQ------------------KFGNWRTALDNCGKMYYWHSESRLSAWELP 297          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1539.3117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJV2_ECTSI1.210e-26295.39WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A484DVK9_BRELC2.240e-1924.91WW domain-containing protein n=1 Tax=Bremia lactuc... [more]
F0WM81_9STRA1.100e-1826.24Uncharacterized protein AlNc14C153G7585 n=1 Tax=Al... [more]
A0A024GN83_9STRA5.670e-1323.76WW domain-containing protein n=1 Tax=Albugo candid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 360..392
e-value: 1.2E-4
score: 31.4
IPR001202WW domainPFAMPF00397WWcoord: 365..390
e-value: 8.5E-7
score: 29.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 365..392
score: 10.522
IPR021150Ubiquinol-cytochrome c chaperone/UPF0174PFAMPF03981Ubiq_cyt_C_chapcoord: 159..288
e-value: 1.7E-15
score: 57.4
NoneNo IPR availableGENE3D2.20.70.10coord: 357..400
e-value: 1.4E-9
score: 39.0
NoneNo IPR availablePANTHERPTHR12184:SF1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1coord: 47..303
IPR007129Ubiquinol-cytochrome c chaperone, CBP3PANTHERPTHR12184BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG ZIC3-BINDING PROTEINcoord: 47..303
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 363..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1539contigE-siliculosus-1a_F_contig1539:5129..10212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1539.3117.1mRNA_E-siliculosus-1a_F_contig1539.3117.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1539 5056..10863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1539.3117.1 ID=prot_E-siliculosus-1a_F_contig1539.3117.1|Name=mRNA_E-siliculosus-1a_F_contig1539.3117.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=413bp
MQLRRNTVMAAVRLVQPLVKASNARGLASCPLRVHSSSGTSPKASASCAA
VQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHE
KWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDG
KISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQM
RSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWR
GVYMSDESIKEPHVRVLAEYVDAELADIYAVDVSEFFAVCIEFAPPPTSE
LKAASKKAAKGGGGKRSSRKGTVAAAAPGLEGGAADLTAAGRGGGIGEKV
RHGDFGSGDGKEGRWRACLAESGKVYYWHTVSREVTWDRPTGAEAYVPSV
MPKTDQTLTAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR007129Ubiqinol_cyt_c_chaperone_CPB3
IPR021150Ubiq_cyt_c_chap/UPF0174
IPR001202WW_dom