prot_E-siliculosus-1a_F_contig1538.3110.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1538.3110.1
Unique Nameprot_E-siliculosus-1a_F_contig1538.3110.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length496
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1538.3110.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.890e-58
Identity = 149/155 (96.13%), Postives = 149/155 (96.13%), Query Frame = 0 
Query:  341 AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPVWGVVT 495
            AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMGG  XXXXXXXXXXXXXXXXXXXXXXXX    PVWGVVT
Sbjct:  355 AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMGGSGXXXXXXXXXXXXXXXXXXXXXXXX---XPVWGVVT 506
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BLAST of mRNA_E-siliculosus-1a_F_contig1538.3110.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.140e-55
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:  340 VAKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMG 457
            VAKERQAAAAKDLERSEDMRRMLEAEVLGLRT+LNEPSTPSQAKYM+LSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMG
Sbjct:  586 VAKERQAAAAKDLERSEDMRRMLEAEVLGLRTKLNEPSTPSQAKYMNLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLRAAGSFMG 703
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BLAST of mRNA_E-siliculosus-1a_F_contig1538.3110.1 vs. uniprot
Match: A0A835YRL9_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 9.680e-10
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 0 
Query:  341 AKERQAAAAKDLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTARREAELQRVLSESRQQSKLELSRLRAIHAD-----------------------EMRAKDALVHGFRAELDGLLRAA 452
            A+E        LERSE+ R  LE EVL LR +   P TPS A+   L++K+E+MERR A ++ ELQR L+E+R+ +KLE  RL+A+H +                       E+R K+A +  FR+EL+ +L AA
Sbjct: 1399 AREHVVTLTVQLERSEEARARLEGEVLELRRQCAMPQTPSAARMEALARKLEDMERRVAAQDEELQRALNEARRGAKLEAMRLQALHDEXXXXXXXXXXXXXXXXXXXXXXXELRDKEAQIDKFRSELEVVLAAA 1533
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1538.3110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRE4_ECTSI2.890e-5896.13Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus ... [more]
A0A6H5KNC7_9PHAE3.140e-5598.31Centrosomal protein of 162 kDa (Fragment) n=1 Tax=... [more]
A0A835YRL9_9STRA9.680e-1039.26Centrosomal protein of 162 kDa n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..258
NoneNo IPR availableCOILSCoilCoilcoord: 145..167
NoneNo IPR availableCOILSCoilCoilcoord: 384..411

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1538contigE-siliculosus-1a_F_contig1538:6625..10405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1538.3110.1mRNA_E-siliculosus-1a_F_contig1538.3110.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1538 6625..10405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1538.3110.1 ID=prot_E-siliculosus-1a_F_contig1538.3110.1|Name=mRNA_E-siliculosus-1a_F_contig1538.3110.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=496bp
MRALKRGSPGTGAGGSRHRGRDGVSALGIAPAGGGGGGGGGGGGPDADGS
SNRGSRGIDGAGDEGEGGGGRVRREQQQQHQVSVAVGLAAMQQGREGENG
GGRGHQGERVDDDDADDSRPLTGRDDGGGGGGGGDDRRLDRGREAEAQEH
QQQQQQRRRRRQEEELERGQGVLRRQRDGNDAPRRSGDGREWSQQRQRRR
PQSESEDSSCRSGRGLLSSSTSSSVPGDALRAERARHERELERERAAAEA
RVGALKVRLMQTAQALGKAQAREQAEAWGRGKARAAAASGGGGGGGGGDG
SPSASGGGGGSSGGAGGGDGEDDVRLRKRRERVLELEAAVAKERQAAAAK
DLERSEDMRRMLEAEVLGLRTRLNEPSTPSQAKYMDLSKKVEEMERRTAR
REAELQRVLSESRQQSKLELSRLRAIHADEMRAKDALVHGFRAELDGLLR
AAGSFMGGGGSGGGEGSGAGGGGGGSEDNPPPPPPPPQPVWGVVT*
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