prot_E-siliculosus-1a_F_contig1536.3104.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1536.3104.1
Unique Nameprot_E-siliculosus-1a_F_contig1536.3104.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length639
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1536.3104.1 vs. uniprot
Match: A0A7S3YP69_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YP69_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 1.660e-10
Identity = 64/238 (26.89%), Postives = 104/238 (43.70%), Query Frame = 0
Query:   53 MLLKGKIYGLPGSRGTRWSNFREWAKNQHPVLSMFFAHELHPFSRTERLSVMMCYLCWAFFITVIFEYGNKDKAAICNAGCNNTYSGRLSGEYYSQEICGPGSGSNEDTISAEEYDSNCDDVTPWWVLSFLIAAVTVPYSTILKFLATCACAQSLPNCLRSCFEWLGALILRLFGVLSVLW-LAMGITFSLELDGGIFIVTYIAGVIKSWFYW----PILAGAVFMYKYKKQRAAFQE 285
            ML     YGLPG+ G   S + E    ++P++++  +H+LHPFSR ER+ V + YL +A F++V FEY                                      +DT               + V S +IAA+TVPY+ +++ +A  +C    P+  + C E  G  +L    + S LW LA  I    E     F++++I   +  +FY+    P+    V    + +QR AF +
Sbjct:    1 MLAAQVAYGLPGTDGKFCSCYSEHVLQENPLIAITDSHDLHPFSRKERVMVFINYLAFALFLSVEFEY-------------------------------------RQDTF--------------FIVKSAIIAALTVPYNMLMRGIAEASCCIGCPSIFQKCCEETGRFVLWALVIQSALWTLAALIVLGEEDKENTFLISWI---LSQFFYYAFFDPLYRMVVVGLFFGRQRRAFDK 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1536.3104.1 vs. uniprot
Match: A0A7S3M2X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2X8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.940e-9
Identity = 66/242 (27.27%), Postives = 99/242 (40.91%), Query Frame = 0
Query:   81 HPVLSMFFAHELHPFSRTERLSVMMCYL----CWAFFI-----TVIFEYGNK--------DKAAICNAGCNNTYSGRLSGEYYSQEICGPGS--------GSNEDTISAEEYDSNCDDVTPWWVLSFLIAAVTVPYSTILKFLATCACAQSLPNCLRSC--------FEWLGALILRLFGVLSVLWLAMGITFSL--ELDGGIFIVTYIAGVIK--SWFYWPILAGAVFMYKYKKQRAAFQE 285
            HP+LS+F  H+LHPFS+  R  V +C L    C+AF +        F+            D +A  N G N+  S   S  +Y   +   G+        G   D  +   Y+  C+    W +LS    A TV Y ++L FLATC+C Q       +C         E LG L L  F +L   +    + +         + +V  +A +     WF W +     F+YKY + R  F +
Sbjct:    8 HPILSIFCTHKLHPFSKKHRFIVFLCSLSFAVCFAFILLDTPLVPTFQVCRSVCNCMLVTDDSAGVNVGANSFTSISGSSVHYGFGLSSNGTLIEETVCVGGVNDGRACSAYNDLCNSYESW-MLSAACGAGTVLYESVLHFLATCSCVQGRKRFQNNCCGSRVKKVIESLGGLTLSFFVLLGFAFTLFTLVYCYVNHFASELLLVLLLAELWSCVQWFIWAL---PWFLYKYPEDRRHFYD 245          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1536.3104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3YP69_9EUKA1.660e-1026.89Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S3M2X8_9STRA9.940e-927.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 416..471
e-value: 5.4E-12
score: 47.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 243..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..242
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..638
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..274
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 101..118
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 220..242
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 419..443
score: 10.502
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 414..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1536contigE-siliculosus-1a_F_contig1536:18529..29941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1536.3104.1mRNA_E-siliculosus-1a_F_contig1536.3104.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1536 18529..30148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1536.3104.1 ID=prot_E-siliculosus-1a_F_contig1536.3104.1|Name=mRNA_E-siliculosus-1a_F_contig1536.3104.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=639bp
MFGTSKISPALPPGSPLTIRSKDAANPGQRSAANGDVDVGDVVEAQRRHI
VFMLLKGKIYGLPGSRGTRWSNFREWAKNQHPVLSMFFAHELHPFSRTER
LSVMMCYLCWAFFITVIFEYGNKDKAAICNAGCNNTYSGRLSGEYYSQEI
CGPGSGSNEDTISAEEYDSNCDDVTPWWVLSFLIAAVTVPYSTILKFLAT
CACAQSLPNCLRSCFEWLGALILRLFGVLSVLWLAMGITFSLELDGGIFI
VTYIAGVIKSWFYWPILAGAVFMYKYKKQRAAFQEAHPGQVAMAWPIDEQ
DPNLDLKVAKDGTIAAYKSPPGSPKAAAAAAPNGQPPPGQSGAATPVVSP
IPQQGQFFGGGGAGGPQAMVVQHMSSPMSPTSTNNSNGMPNNGYGGGAPP
LQQPGYAAPTYAAHMAGGPTLPPGWEMKMEPDGRMLYIDHNTKARASSGA
YRSCEKTERKRTTHWTHPSMQQQRQQQMGPPAGGAGYPGPPAPGFVPPAY
GGQPAHQQPYQQQQQQPMGGYHAPQQRPMGGYHDQQQPQQQLGYPPAGGY
PGQTQQQPPPGYPVQQPSGGYPGQQQQQHQHMMSPPMMQHQQAPVVMEFK
VPDGVVAGDTINSPKGIIEVKIPDGSSSGDTLQIPLPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom