prot_E-siliculosus-1a_F_contig1536.3102.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1536.3102.1
Unique Nameprot_E-siliculosus-1a_F_contig1536.3102.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length200
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1536.3102.1 vs. uniprot
Match: A0A6H5JIJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIJ6_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 7.950e-100
Identity = 178/198 (89.90%), Postives = 182/198 (91.92%), Query Frame = 0 
Query:    2 MEQQEMEGGLEVMEADLAETENSIYHLVRSNVELAQFLNEAPGDEDLEQAIEENKAVLVRRRHRVKTLRLAISDLKTQRPHMATAAAPSSSARIAVSASGPLDAQSMDRHNGTSSESTDRTVSPTEVSTGGGSGDVISTMTASMSLDAAPPIPPAGSSIMAGNSQASDKTPETGGSDQVSAXXXXXXXGGRDEGGVLL 199
            ME++EMEGGLEVMEADLAETENSIYHLVRSNVELAQFLNEAPGDEDLEQAIEENKAVLVRRRHRVKTLRLAISDLKTQRPHMATAAAPSSSARIA S SGP DAQSM RHNGT+SES D TVSPT VS+ GGSGDVISTMTASMSLDAAPPIPPAGSSI AGNSQASDKTPETGG      XXXXXXXG RDEGGVLL
Sbjct:    1 MEKKEMEGGLEVMEADLAETENSIYHLVRSNVELAQFLNEAPGDEDLEQAIEENKAVLVRRRHRVKTLRLAISDLKTQRPHMATAAAPSSSARIAASTSGPRDAQSMGRHNGTTSESADHTVSPTVVSSAGGSGDVISTMTASMSLDAAPPIPPAGSSIAAGNSQASDKTPETGGXXXXXXXXXXXXXGDRDEGGVLL 198
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1536.3102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIJ6_9PHAE7.950e-10089.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038966Translation machinery-associated protein 17PANTHERPTHR40422FAMILY NOT NAMEDcoord: 11..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1536contigE-siliculosus-1a_F_contig1536:751..4583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1536.3102.1mRNA_E-siliculosus-1a_F_contig1536.3102.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1536 670..5560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1536.3102.1 ID=prot_E-siliculosus-1a_F_contig1536.3102.1|Name=mRNA_E-siliculosus-1a_F_contig1536.3102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp
MMEQQEMEGGLEVMEADLAETENSIYHLVRSNVELAQFLNEAPGDEDLEQ
AIEENKAVLVRRRHRVKTLRLAISDLKTQRPHMATAAAPSSSARIAVSAS
GPLDAQSMDRHNGTSSESTDRTVSPTEVSTGGGSGDVISTMTASMSLDAA
PPIPPAGSSIMAGNSQASDKTPETGGSDQVSAAAAETGGGGRDEGGVLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038966TMA17