prot_E-siliculosus-1a_F_contig1535.3099.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1535.3099.1
Unique Nameprot_E-siliculosus-1a_F_contig1535.3099.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length170
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1535.3099.1 vs. uniprot
Match: D7FHY3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY3_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.310e-7
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    1 KAEFCSKHYRPGMVNVESKKCGHQGCKKHPSYGKGGNK 38
            KAEFCSKH +PGM+NV +K+CGH GC K PSYG  G K
Sbjct:   50 KAEFCSKHSKPGMINVVNKRCGHPGCMKQPSYGNHGMK 87
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BLAST of mRNA_E-siliculosus-1a_F_contig1535.3099.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 6.860e-7
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    1 KAEFCSKHYRPGMVNVESKKCGHQGCKKHPSYG 33
            KAEFCSKH +PGM+N+  K+CGH GC K PSYG
Sbjct:   45 KAEFCSKHSKPGMINLTKKRCGHPGCIKQPSYG 77
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BLAST of mRNA_E-siliculosus-1a_F_contig1535.3099.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 7.130e-7
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:    1 KAEFCSKHYRPGMVNVESKKCGHQGCKKHPSYG 33
            KAEFCSKH +PGM NV  K+CGH GC K PSYG
Sbjct:   49 KAEFCSKHSKPGMTNVTKKRCGHAGCIKQPSYG 81
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BLAST of mRNA_E-siliculosus-1a_F_contig1535.3099.1 vs. uniprot
Match: A0A6H5K5N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N3_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 8.710e-7
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    2 AEFCSKHYRPGMVNVESKKCGHQGCKKHPSYGKGGNK 38
            AEFCS+H +  MVNV SK+CGH GC K PSYG+ G+K
Sbjct:   22 AEFCSQHKQQDMVNVVSKRCGHPGCTKQPSYGRAGSK 58
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1535.3099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHY3_ECTSI1.310e-768.42EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KY67_9PHAE6.860e-769.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY22_ECTSI7.130e-772.73EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K5N3_9PHAE8.710e-764.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018523Isocitrate lyase/phosphorylmutase, conserved sitePROSITEPS00161ISOCITRATE_LYASEcoord: 19..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1535contigE-siliculosus-1a_F_contig1535:15300..15809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1535.3099.1mRNA_E-siliculosus-1a_F_contig1535.3099.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1535 15300..15809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1535.3099.1 ID=prot_E-siliculosus-1a_F_contig1535.3099.1|Name=mRNA_E-siliculosus-1a_F_contig1535.3099.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=170bp
KAEFCSKHYRPGMVNVESKKCGHQGCKKHPSYGKGGNKKAEFCAQHSHKG
MVNIVTRRCGHPGCMKHPSYGAHLGKKAEFCAEHSQEGMVDVVKKRCGHA
GCTKRASYGMGDSKKPELCSQHAKQGMVDVVSKRCGHPGCRKHPSYAKAL
CKTAEVRAVHTQEGMVNVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018523Isocitrate_lyase_ph_CS