prot_E-siliculosus-1a_F_contig1533.3090.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1533.3090.1
Unique Name	prot_E-siliculosus-1a_F_contig1533.3090.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	772

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1533.3090.1 vs. uniprot
Match: D8LGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX5_ECTSI)

HSP 1 Score: 702 bits (1812), Expect = 2.410e-244
Identity = 540/621 (86.96%), Postives = 543/621 (87.44%), Query Frame = 0

Query:  151 GGSVGVSRARRVRRRGFIGPTAVARGDTRPGGGSRSGTGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPDDFDYGXXXXXXXXXXXXXXXXXXXXXXFCWPEDEEEAATLLPQEGEDSISELDLKDGISLAAESSLFQQQXXXXXXXXXXXXXSRPDRTRMSGVGFRKSRAGGEERRADTASGPSLGGRTAAXXXXXXSPALESSTAGSAPLRLLTNPAEDEFTAPSAETPAARGELEVVAPDDGDEPRPGERWQHQRSVLGAVVSALAGALGLKLWEGLVRGDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTEALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLMQRLLDAVAKAERADEEESDAATAKAVAXXXXXXXXXXXAREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRSMSDGITAGGTASERPTSGRXTGSGNSSGSSPPE 771
            GGS+GVSRARRVRRRGFIGP AV RGDTRP GGSRSGTG V        XXXXXXXXXX                 FPDDFDYG  XXXXXXXXXXXXX       FCWPEDEE AA LLPQEGEDSISELDLKDGISLAAESS FQQQXXXXXXXXXXXXXSRPDRTR+SGVGFRKSRAGGEERRA TASGPSL      XXXXXX PALESS AGSAPLRLLTNPAEDEF  PSAETPAARGELE VAPDDGDEPRPGER QH RSVLGAVVSALAGALGLKLWEGL RGDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETT+ALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATL QRLLDAVAKAERADEEE DAATAKAVA  XXXXXXXX AREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGR MS GITAGG          X    N SGSSPPE
Sbjct:    2 GGSIGVSRARRVRRRGFIGPKAVERGDTRPSGGSRSGTGSVMAAKKIRGXXXXXXXXXXVRRWFGGRGSDDNRYDEFPDDFDYGSAXXXXXXXXXXXXXGDGSSALFCWPEDEEGAAALLPQEGEDSISELDLKDGISLAAESSPFQQQXXXXXXXXXXXXXSRPDRTRVSGVGFRKSRAGGEERRAATASGPSLXXXXXXXXXXXX-PALESSAAGSAPLRLLTNPAEDEFMPPSAETPAARGELEAVAPDDGDEPRPGERRQHHRSVLGAVVSALAGALGLKLWEGLARGDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTKALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLTQRLLDAVAKAERADEEERDAATAKAVAERXXXXXXXXAAREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRPMSGGITAGGXXXXXXXXXXXXXXXNGSGSSPPE 621

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BLAST of mRNA_E-siliculosus-1a_F_contig1533.3090.1 vs. uniprot
Match: A0A6H5KQY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY4_9PHAE)

HSP 1 Score: 657 bits (1694), Expect = 2.040e-226
Identity = 506/633 (79.94%), Postives = 517/633 (81.67%), Query Frame = 0

Query:  154 VGVSRARRVRRRGFIGPTAVARGDTRPGG------------GSRSGTGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FPDDFDYGXXXXXXXXXXXXXXXXXXXXXXFCWPEDEEEAATLLPQEGEDSISELDLKDGISLAAESSLFQQQXXXXXXXXXXXXXSRPDRTRMSGVGFRKSRAGGEERRADTASGPSLGGRTAAXXXXXXSPALESSTAGSAPLRLLTNPAEDEFTAPSAETPAARGELEVVAPDDGDEPRPGERWQHQRSVLGAVVSALAGALGLKLWEGLVRGDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAMLEAVRAETTEALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLMQRLLDAVAKAERADEEESDAATAKAVAXXXXXXXXXXXAREEETARCREEFYSALAEEKEKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRSMSDGITAGGTASERPTSGRXTGSGNSSGSS-PPE 771
            +GVSRARRVRR+GFIGPTA ARGDT P              GSRSGTG V        XXXXXXXXXXXXX                FPDDFDY   XXXXXXXXXXXXXXXXXX  FCWPEDE  AA LL QEGEDSISEL+LKDGISLAAESSLF QQ             S PDR R+SG GFRKSR G EERRA TASGPSLGGRTAA      S ALES     APL LLTNPAEDEFT PSAE  AARGELE+V PDDGDEPRPG RWQ QRSVLGAVVSAL GALGLKLWEGLVRG ASA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQES+TAMLE VRAET +ALKQGSHATAAAA AA+EEVRQ RAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEV RLKESTATL QRLLDAVAKAERADEEE DAATAKAVA        XXXAREEETARCREEFYSALAEEK+KLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGR ++ GITAGGTASERPTSGR TGSGNS GSS PPE
Sbjct:    1 MGVSRARRVRRKGFIGPTAAARGDTCPXXXXXXXXXXXXXXGSRSGTGSVAAAKMIRGXXXXXXXXXXXXXRRWFGGRSSDDGRYDEFPDDFDYDSAXXXXXXXXXXXXXXXXXXALFCWPEDEXXAAALLAQEGEDSISELELKDGISLAAESSLFHQQQEQGTDGGSTSG-SLPDRRRVSGAGFRKSRVGEEERRAGTASGPSLGGRTAAAAAAA-SRALES-----APLPLLTNPAEDEFTPPSAEPSAARGELEIVPPDDGDEPRPGGRWQRQRSVLGAVVSALMGALGLKLWEGLVRGGASAEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILALENQLAYLEEDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESKTAMLEVVRAETAKALKQGSHATAAAAEAANEEVRQVRAELEAAQALLEEALKEKAVAVQEKAAGDALLRTEQGKRAALEKEVVRLKESTATLTQRLLDAVAKAERADEEERDAATAKAVAEREEIETAXXXAREEETARCREEFYSALAEEKKKLRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRPVNGGITAGGTASERPTSGRTTGSGNSGGSSSPPE 626

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1533.3090.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1533.3090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LGX5_ECTSI	2.410e-244	86.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQY4_9PHAE	2.040e-226	79.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 572..606
None	No IPR available	COILS	Coil	Coil	coord: 652..681
None	No IPR available	COILS	Coil	Coil	coord: 528..555
None	No IPR available	COILS	Coil	Coil	coord: 475..502
None	No IPR available	COILS	Coil	Coil	coord: 614..641

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1533	contig	E-siliculosus-1a_F_contig1533:7878..13598 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1533.3090.1	mRNA_E-siliculosus-1a_F_contig1533.3090.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1533 7878..13598 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1533.3090.1 ID=prot_E-siliculosus-1a_F_contig1533.3090.1|Name=mRNA_E-siliculosus-1a_F_contig1533.3090.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=772bp
LSCAHVTLLCCTDLSTTRARAAYPKVRRRGVTERQGTVAQSFTMHGHCGL
AIVTAATLVTTGTGIRTAAAAVAAAAGDGPVPPLRGGGPIQRPQASSRPS
PEPPTWSGTRAEGPSPDDSRDTKPPLRTPPEHPEATEVSWEPEGVRTSRT
GGSVGVSRARRVRRRGFIGPTAVARGDTRPGGGSRSGTGGVAAAKMIRGG
GGGGGGAGVRRWFGGRSSDNSRYYDEFPDDFDYGSAADDDADENSSSSAG
DGSSALFCWPEDEEEAATLLPQEGEDSISELDLKDGISLAAESSLFQQQQ
EQGTGSGSTSSSSRPDRTRMSGVGFRKSRAGGEERRADTASGPSLGGRTA
AAAAAAASPALESSTAGSAPLRLLTNPAEDEFTAPSAETPAARGELEVVA
PDDGDEPRPGERWQHQRSVLGAVVSALAGALGLKLWEGLVRGDASAAAAA
AAAAEVEGGVSRGGVEEEEEAAAAAAVMEEEAALQQEKILALENQLAYLE
EDRRRAALSAKEARSNRRKDDRQLKEYVHTLEVHLDQLSKEKQESETAML
EAVRAETTEALKQGSHATAAAAAAADEEVRQARAELEAAQALLEEALKEK
AVAVQEKAAGDALLRTEQGKRAALEKEVERLKESTATLMQRLLDAVAKAE
RADEEESDAATAKAVAEREEIEAAVAAAREEETARCREEFYSALAEEKEK
LRKQMEVRLATMRAGLKRRLQEARSERRGTTGSVSGRSMSDGITAGGTAS
ERPTSGRTTGSGNSSGSSPPE*