prot_E-siliculosus-1a_F_contig153.3066.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig153.3066.1
Unique Nameprot_E-siliculosus-1a_F_contig153.3066.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length104
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig153.3066.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 6.840e-59
Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLGAPAAAVEYMVTTCADLADVDDTQVTGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQVGTGTT 104
            MKPVSLTFIASLL  PAAAVEYMVTTCADLADVDDTQVTGLTIDA+TFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQ   GTT
Sbjct:    1 MKPVSLTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTT 104
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BLAST of mRNA_E-siliculosus-1a_F_contig153.3066.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 4.820e-50
Identity = 91/102 (89.22%), Postives = 92/102 (90.20%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLGAPAAAVEYMVTTCADLADVDDTQVTGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQVGTG 102
            MKP SLT IA LL APAAAVEY V TCADLADVDDTQVTGLTID STFACDEYTRF VRNSMTLKATV+AVEFGNFSLKVLGELTVEPDVTFNGVVDQV  G
Sbjct:    1 MKPCSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNG 102
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BLAST of mRNA_E-siliculosus-1a_F_contig153.3066.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 2.690e-49
Identity = 91/102 (89.22%), Postives = 92/102 (90.20%), Query Frame = 0 
Query:    1 MKPVSLTFIASLLGAPAAAVEYMVTTCADLADVDDTQVTGLTIDASTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQVGTG 102
            MK VSLT IASLL APAAAVEY V TCADLADVDDTQVT LTIDASTFACDEYTRFRVRN+MTLKATV AVEFGNFSLKVLGELTVEPDV FNGVVDQV  G
Sbjct:    1 MKTVSLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNG 102
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig153.3066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQG2_ECTSI6.840e-5994.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ44_ECTSI4.820e-5089.22Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI2.690e-4989.22Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.704

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig153contigE-siliculosus-1a_F_contig153:775..1086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig153.3066.1mRNA_E-siliculosus-1a_F_contig153.3066.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig153 775..1086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig153.3066.1 ID=prot_E-siliculosus-1a_F_contig153.3066.1|Name=mRNA_E-siliculosus-1a_F_contig153.3066.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=104bp
MKPVSLTFIASLLGAPAAAVEYMVTTCADLADVDDTQVTGLTIDASTFAC
DEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQVG
TGTT
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