prot_E-siliculosus-1a_F_contig1529.3059.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1529.3059.1
Unique Nameprot_E-siliculosus-1a_F_contig1529.3059.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length80
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1529.3059.1 vs. uniprot
Match: D8LMP0_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP0_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 9.230e-37
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    6 EEVVRRGERAGGVGLEPLELPRPPTGPNASGGKPEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG 80
            EEVVRRGERAGG+GLEPLELPRPPTGPNASGGKPEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG
Sbjct:  164 EEVVRRGERAGGLGLEPLELPRPPTGPNASGGKPEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG 238
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BLAST of mRNA_E-siliculosus-1a_F_contig1529.3059.1 vs. uniprot
Match: A0A6H5KXW6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW6_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.110e-35
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0 
Query:    6 EEVVRRGERAGGVGLEPLELPRPPTGPNASGGKPEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG 80
            EEVVRRGE+AGGVGLEPLELPRPPTGPNAS G PEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG
Sbjct:  162 EEVVRRGEKAGGVGLEPLELPRPPTGPNASAGNPEDDVEESPRSSPLGQGPGLQAIAFEAAESGKASPSLSGGAG 236
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1529.3059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMP0_ECTSI9.230e-3798.67FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KXW6_9PHAE3.110e-3596.00FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1529contigE-siliculosus-1a_F_contig1529:391..2418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1529.3059.1mRNA_E-siliculosus-1a_F_contig1529.3059.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1529 391..2418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1529.3059.1 ID=prot_E-siliculosus-1a_F_contig1529.3059.1|Name=mRNA_E-siliculosus-1a_F_contig1529.3059.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=80bp
GGGGAEEVVRRGERAGGVGLEPLELPRPPTGPNASGGKPEDDVEESPRSS
PLGQGPGLQAIAFEAAESGKASPSLSGGAG
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