prot_E-siliculosus-1a_F_contig1526.3044.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1526.3044.1
Unique Name	prot_E-siliculosus-1a_F_contig1526.3044.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	444

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: D7FL75_ECTSI (DNA-damage repair protein drt111, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL75_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 4.700e-199
Identity = 389/420 (92.62%), Postives = 389/420 (92.62%), Query Frame = 0

Query:   25 MDIYADLPSAKPSADVAXXXXXXXXXXXXXXXKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSKTXXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGSPEMREPPTPAXXXXXVPGQLDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK 444
            MDIYADLPSAKPSADVA     XXXXXX    KGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSK XXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKI XXXXXXXXXXXX  RAATIKKIQEAAAKSHEVGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGSPEM                LDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPA PARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK
Sbjct:    1 MDIYADLPSAKPSADVAVASAAXXXXXXSPASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSKXXXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIIXXXXXXXXXXXXEERAATIKKIQEAAAKSHEVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGSPEM---------------PLDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAAPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK 405

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A6H5KK36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK36_9PHAE)

HSP 1 Score: 566 bits (1459), Expect = 3.970e-198
Identity = 382/420 (90.95%), Postives = 386/420 (91.90%), Query Frame = 0

Query:   25 MDIYADLPSAKPSADVAXXXXXXXXXXXXXXXKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSKTXXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGSPEMREPPTPAXXXXXVPGQLDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK 444
            MDIYADLPSAKPSA+VA    XXXXXXXXX  KGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPG   AAGARP+KT       XXXXX ET SPAA+RPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERD     XXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXX LSNLPAWVTKGKG TPGSPEM EPPTPA     VPGQLDAVPEAGQRGGRFGPQAKAGGAG+GGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAP ARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK
Sbjct:    1 MDIYADLPSAKPSANVAVASPXXXXXXXXXASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGXXXAAGARPNKTISKAESSXXXXXKETTSPAATRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDXXXXXXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXXLSNLPAWVTKGKGATPGSPEMLEPPTPARRPPPVPGQLDAVPEAGQRGGRFGPQAKAGGAGIGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK 420

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A835ZCV1_9STRA (Putative DNA-damage repair protein drt111 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.030e-30
Identity = 131/337 (38.87%), Postives = 155/337 (45.99%), Query Frame = 0

Query:  119 PSPAASRPQSWDMGFGDVD--DDYDPARPNDYMEYCRERIDKKKQEERDRELKIXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTK--GKGGTPGSPEMREPPTPAXXXXXVPGQLDAVPEAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARK---------KRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYE 442
            P  +     S + GF D D  D YDPARPNDYM YC+ RI+ K+QEER+RELK                           A    +   XXXXXXXXXXXXXXX                        A            G+ NLPAW+TK   +GG              XXXXX                   P                 GM  A+ +MAKMG +EG+GLG S QGISQP+ + S G GMG + MH +D+KR       PA  A           KRGLFSNPT VLLLKNMVG GEVD +LEGE   EC ++GPVR+CL+ E
Sbjct:   71 PHASTQSASSEESGFNDRDVPDPYDPARPNDYMAYCKYRIETKRQEERERELK---------------------------AIMEEQRXXXXXXXXXXXXXXXXXLPPQLQAKLGAAPLLPPMAGLAPPAVPGPPAGRGRGRGMVNLPAWLTKMQQEGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP----------------GGMALAQSLMAKMGWQEGKGLGKSGQGISQPIVAQSTGVGMGTVAMHPADRKR-------PAQAAXXXXXXXXXSAKRGLFSNPTCVLLLKNMVGAGEVDSDLEGEVKEECMKYGPVRQCLVRE 357

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A6U3SBK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SBK6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.500e-28
Identity = 62/120 (51.67%), Postives = 76/120 (63.33%), Query Frame = 0

Query:  327 ESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMH--HSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK 444
            + G N A  MM  MG  +G+GLG   QGIS+PL++   GGG G +       ++K        P P A+KKR LF NPT VLLLKNMVGPGEVD ELE E   EC +FGPVR C++YE+K
Sbjct:   25 KGGGNLAMNMMKGMGWTDGEGLGREGQGISRPLEARPTGGGQGAVANPGARGNQKLSTSMLPPPGPAAKKKRALFRNPTTVLLLKNMVGPGEVDSELEKEVQEECSKFGPVRTCVVYELK 144

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: W7TGN1_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGN1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.510e-24
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0

Query:  337 MAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARK-----KRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            M K+G++EG GLG  RQGI++ +++ + GGG GVI       K   G  D             KRGLFSNPT+++LLKNMVGPGEVDD+L+GET+ EC + GPV  CL++E+
Sbjct:    1 MKKLGYQEGAGLGRDRQGITEAIKARALGGGKGVISGPAQGGK---GAQDVDRQQXXXXXXXXKRGLFSNPTKIVLLKNMVGPGEVDDDLQGETAEECAKHGPVSECLVFEV 109

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A078FCH5_BRANA (BnaC03g59760D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078FCH5_BRANA)

HSP 1 Score: 104 bits (259), Expect = 1.460e-21
Identity = 60/114 (52.63%), Postives = 72/114 (63.16%), Query Frame = 0

Query:  330 MNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            M  AERMMAKMG K+GQGLG S QGI+ PL +       GVI ++ S+KK + G S            +   PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI
Sbjct:  125 MTAAERMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVI-VNASEKKVVKGVS------------ISGEPTRVLLLRNMVGPGEVDDELEEEVGTECGKYGTVTRVLIFEI 225

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A8D9M5D0_BRACM ((field mustard) hypothetical protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9M5D0_BRACM)

HSP 1 Score: 104 bits (259), Expect = 1.540e-21
Identity = 60/114 (52.63%), Postives = 72/114 (63.16%), Query Frame = 0

Query:  330 MNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            M  AERMMAKMG K+GQGLG S QGI+ PL +       GVI ++ S+KK + G S            +   PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI
Sbjct:  128 MTAAERMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVI-VNASEKKVVKGVS------------ISGEPTRVLLLRNMVGPGEVDDELEEEVGTECGKYGTVTRVLIFEI 228

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A7J9F154_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9F154_9ROSI)

HSP 1 Score: 103 bits (257), Expect = 1.580e-21
Identity = 64/128 (50.00%), Postives = 74/128 (57.81%), Query Frame = 0

Query:  317 GAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNP-TRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            G G GGG      M  A+RMMAKMG KEGQGLG   QGI+ PL +       GVI             S+T  P  + K   F+ P TRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI
Sbjct:   82 GVGAGGGQ-----MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIV----------NASETSKPDKKVKSVSFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI 194

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A2P2JRV5_RHIMU (DNA-damage-repair/toleration protein DRT111 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JRV5_RHIMU)

HSP 1 Score: 102 bits (253), Expect = 1.660e-21
Identity = 65/130 (50.00%), Postives = 79/130 (60.77%), Query Frame = 0

Query:  316 GGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSN--PTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            GG GVG    A   M  A+RMMAKMG KEGQGLG   QGI+ PL +       GVI ++ S+ K           P +K + +  N  P+RVLLLKNMVGPGEVDDELE E + EC ++G V R LI+EI
Sbjct:   27 GGLGVG----ARGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLLAKKTDRRAGVI-VNASETK-----------PEKKVKSVNFNGLPSRVLLLKNMVGPGEVDDELEDEVASECAKYGTVTRVLIFEI 140

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Match: A0A3P6BYG9_BRACM (Uncharacterized protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A3P6BYG9_BRACM)

HSP 1 Score: 104 bits (259), Expect = 1.720e-21
Identity = 60/114 (52.63%), Postives = 72/114 (63.16%), Query Frame = 0

Query:  330 MNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEI 443
            M  AERMMAKMG K+GQGLG S QGI+ PL +       GVI ++ S+KK + G S            +   PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI
Sbjct:  134 MTAAERMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRRAGVI-VNASEKKVVKGVS------------ISGEPTRVLLLRNMVGPGEVDDELEEEVGTECGKYGTVTRVLIFEI 234

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1526.3044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FL75_ECTSI	4.700e-199	92.62	DNA-damage repair protein drt111, putative n=1 Tax...	[more]
A0A6H5KK36_9PHAE	3.970e-198	90.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZCV1_9STRA	1.030e-30	38.87	Putative DNA-damage repair protein drt111 n=1 Tax=...	[more]
A0A6U3SBK6_9STRA	1.500e-28	51.67	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
W7TGN1_9STRA	1.510e-24	49.11	RNA binding protein n=1 Tax=Nannochloropsis gadita...	[more]
A0A078FCH5_BRANA	1.460e-21	52.63	BnaC03g59760D protein n=1 Tax=Brassica napus TaxID...	[more]
A0A8D9M5D0_BRACM	1.540e-21	52.63	(field mustard) hypothetical protein n=1 Tax=Brass...	[more]
A0A7J9F154_9ROSI	1.580e-21	50.00	Uncharacterized protein n=2 Tax=Gossypium TaxID=36...	[more]
A0A2P2JRV5_RHIMU	1.660e-21	50.00	DNA-damage-repair/toleration protein DRT111 n=2 Ta...	[more]
A0A3P6BYG9_BRACM	1.720e-21	52.63	Uncharacterized protein n=1 Tax=Brassica campestri...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..192
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 327..371 e-value: 1.9E-5 score: 34.1
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 330..361 e-value: 6.8E-9 score: 35.5
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 329..386 score: 11.912
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 403..444 e-value: 6.0E-8 score: 34.6
IPR040052	Splicing factor 45	PANTHER	PTHR13288	SPLICING FACTOR 45 SPF45	coord: 25..444

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1526	contig	E-siliculosus-1a_F_contig1526:765..6764 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1526.3044.1	mRNA_E-siliculosus-1a_F_contig1526.3044.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1526 765..6764 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1526.3044.1 ID=prot_E-siliculosus-1a_F_contig1526.3044.1|Name=mRNA_E-siliculosus-1a_F_contig1526.3044.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=444bp
PVLPDRERWCVLLRTQQEPREYIQMDIYADLPSAKPSADVAVASPATAAA
SASPASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARP
SKTKSKAESSTPTKSKETPSPAASRPQSWDMGFGDVDDDYDPARPNDYME
YCRERIDKKKQEERDRELKIIMEEQERERKRQDEERAATIKKIQEAAAKS
HEVGGGGPGAAGGGVGIGGGGIGAPAMAGVGRGRGGGGGPGHDVAAMDAS
MGRGRGRGLSNLPAWVTKGKGGTPGSPEMREPPTPARRPPPVPGQLDAVP
EAGQRGGRFGPQAKAGGAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGA
SRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAPPARKKRGLFS
NPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040052	RBM17
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000467	G_patch_dom