prot_E-siliculosus-1a_F_contig1525.3040.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1525.3040.1
Unique Nameprot_E-siliculosus-1a_F_contig1525.3040.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length135
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A6H5KVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT8_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 5.520e-78
Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0
Query:    1 PNVAAGRTVTPEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            PNVA GRTV P+VVPVELVTVGEL+GVPRSTRGRLTIEQVNAAV DIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGR FIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV
Sbjct:  230 PNVATGRTVMPKVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: D8LPM8_ECTSI (Similar to C18orf24 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM8_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 9.800e-77
Identity = 122/124 (98.39%), Postives = 122/124 (98.39%), Query Frame = 0
Query:   11 PEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            PEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAV DIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGR FIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV
Sbjct:    2 PEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 125          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A835YPY4_9STRA (C18orf24 protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.890e-24
Identity = 48/120 (40.00%), Postives = 80/120 (66.67%), Query Frame = 0
Query:   16 VELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFK-KGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            ++LVT  EL  +P++TRGRL ++ VNAA+ ++Q  +  ++  L++P+ K++EK R R E+    E P H G  F+ E ++R+  +   KGE TA+ ++ +LR+LKR + +R  G+MTYVV
Sbjct:    4 IQLVTSAELQALPKTTRGRLQLDHVNAAITELQAVLTTKYTLLARPKSKLNEKLRRRYEQYAAAEAPEHEGAHFLTESEMRSCAALGGKGEATARLMLNSLRSLKRFRPLRANGVMTYVV 123          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A7K6LCH4_9CORV (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Falcunculus frontatus TaxID=254539 RepID=A0A7K6LCH4_9CORV)

HSP 1 Score: 73.6 bits (179), Expect = 6.070e-14
Identity = 38/117 (32.48%), Postives = 70/117 (59.83%), Query Frame = 0
Query:   18 LVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            L+T+ E + VP   +GRLT +Q+NA V ++ KA+  ++  + +P K MS   R   ++ + QE  A  G  FI E D++A    K  +    ++++ LR+ +R++ +RG+G++ YV+
Sbjct:   31 LITMEEFESVPAYMKGRLTYDQINAVVQEMNKAVAAKYKIMYQPLKNMSIPDRNLYDKFMEQETNATRGLFFIVEADIKAFTQLK-ADKRFHSILSILRHCQRVREIRGSGLVRYVI 146          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A852JT92_SPIPA (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Spizella passerina TaxID=40210 RepID=A0A852JT92_SPIPA)

HSP 1 Score: 74.3 bits (181), Expect = 2.160e-13
Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 0
Query:   16 VELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            V  +TV E + VP   +GR+T +Q+NA V +I KA+E ++  L +P K MS   R      + +E     G  FI E D++A    K  +    ++++ LR+L+R++ +RG+G++ YV+
Sbjct:  137 VPFITVEEFEKVPAYLKGRITYDQINAVVQEINKAVEGKYKILYQPLKSMSAPVRNLYHRFIEEETKDTKGSFFIVEEDIKAFTQLKL-DKRFHSIVSILRHLQRVREIRGSGLIRYVI 254          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A7L4CMA9_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Nyctiprogne leucopyga TaxID=382315 RepID=A0A7L4CMA9_9AVES)

HSP 1 Score: 71.2 bits (173), Expect = 2.910e-12
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   10 TPEVVPVE---LVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            T E +P++   L+T  E + VP   +GRLT EQ+NA V DI KA+  ++  L +P K M+   R      L +E     G  FI E DL+     K  +     +++ LR+ +R++ VRG+ ++ Y++
Sbjct:  124 TKEPIPIKEISLITAEEFESVPTYMKGRLTYEQINAVVKDINKAVVGKYKILHQPLKSMNAAVRNLYHRFLEEETKETKGEFFIVEADLKQFTELKV-DKRFHGILSILRHCRRMREVRGSRLVRYII 250          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A852N8Z8_9PASS (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Pteruthius melanotis TaxID=357074 RepID=A0A852N8Z8_9PASS)

HSP 1 Score: 68.6 bits (166), Expect = 5.210e-12
Identity = 38/117 (32.48%), Postives = 67/117 (57.26%), Query Frame = 0
Query:   18 LVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            L+T  E   VP   +GR+T +Q+NA V +I KA+  ++  L +P K +S + R   +  L +E     G+ FI E DL+A    K  +    ++++ LR+ +R++ VR +G++ YV+
Sbjct:   31 LITTEEFGSVPAYMKGRITCDQINAVVQEINKAVVAKYKILHQPLKSVSVQVRNLYDRFLEEETKDTRGQFFIVEADLKAFTQLKL-DKRFHSILSILRHCQRVREVRSSGLIRYVI 146          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A3B4BVP7_PYGNA (Spindle and kinetochore-associated protein 1 n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4BVP7_PYGNA)

HSP 1 Score: 70.5 bits (171), Expect = 5.970e-12
Identity = 41/119 (34.45%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   16 VELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            +E +TV E D +P+  +GR+T +Q+NAAV  I  A+  ++  L +P K ++   R   +    QE     G+ F+ E DLR L   K  +  A  ++  LR+ +RLK +RG G++ YV+
Sbjct:  138 MEFITVQEFDSIPQYMKGRVTYDQLNAAVKSINVAVTGKYKILHQPVKSLTNASRKLHQRFKDQETKDTKGQFFVVEEDLRDLAQLKVDKRFA-GMLNMLRHCQRLKELRGGGLIRYVL 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A7L0L6I0_9SYLV (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Sylvietta virens TaxID=208069 RepID=A0A7L0L6I0_9SYLV)

HSP 1 Score: 68.2 bits (165), Expect = 7.330e-12
Identity = 37/117 (31.62%), Postives = 66/117 (56.41%), Query Frame = 0
Query:   18 LVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            L+T  E + VPR  +GR+T +Q+NA V  + KA+  ++  + +P K MS   R      + +E     G  FI E D++     K  +    ++++ LR+L+R++ VRG+G++ YV+
Sbjct:   31 LITTEEYESVPRYLKGRITYDQINAVVQQMNKAVVDKYKIVYQPLKSMSASVRNLYRRFVEEETKNTKGVFFIVEADIKEFTELKM-DKRFHSILSILRHLRRVREVRGSGLIRYVI 146          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Match: A0A7K7L7P6_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Asarcornis scutulata TaxID=75869 RepID=A0A7K7L7P6_9AVES)

HSP 1 Score: 68.9 bits (167), Expect = 7.640e-12
Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = 0
Query:   18 LVTVGELDGVPRSTRGRLTIEQVNAAVADIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPSFKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV 134
            L+T  E + VP   +GRLT +Q+NA V D+ KA+  ++  L +P K M+   R      LG+E     G  F+ E D++     K  +   + ++  LR+ +R++ VRGA ++ YV+
Sbjct:   67 LITTEEFESVPAYMKGRLTYDQINAVVQDLNKAVVGKYKILHQPLKSMNASVRNLYHRFLGEETKDTKGEFFVVEADIKEFTQLKVDKRFHR-ILNILRHCQRVREVRGARLVRYVI 182          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVT8_9PHAE5.520e-7895.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPM8_ECTSI9.800e-7798.39Similar to C18orf24 protein n=1 Tax=Ectocarpus sil... [more]
A0A835YPY4_9STRA5.890e-2440.00C18orf24 protein-like protein n=1 Tax=Tribonema mi... [more]
A0A7K6LCH4_9CORV6.070e-1432.48Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A852JT92_SPIPA2.160e-1333.61Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L4CMA9_9AVES2.910e-1232.81Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A852N8Z8_9PASS5.210e-1232.48Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A3B4BVP7_PYGNA5.970e-1234.45Spindle and kinetochore-associated protein 1 n=1 T... [more]
A0A7L0L6I0_9SYLV7.330e-1231.62Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7K7L7P6_9AVES7.640e-1232.48Spindle and kinetochore-associated protein 1 (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009829Spindle and kinetochore-associated protein 1PFAMPF07160SKA1coord: 12..127
e-value: 1.3E-23
score: 84.1
IPR009829Spindle and kinetochore-associated protein 1PANTHERPTHR28573FAMILY NOT NAMEDcoord: 12..133
IPR042031SKA1 microtubule binding domainGENE3D1.10.10.1890coord: 13..134
e-value: 1.7E-29
score: 104.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1525contigE-siliculosus-1a_F_contig1525:12849..14106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1525.3040.1mRNA_E-siliculosus-1a_F_contig1525.3040.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1525 12849..14106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1525.3040.1 ID=prot_E-siliculosus-1a_F_contig1525.3040.1|Name=mRNA_E-siliculosus-1a_F_contig1525.3040.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=135bp
PNVAAGRTVTPEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVADIQKA
IERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRSFIAEPDLRALPS
FKKGEMTAKALIATLRNLKRLKGVRGAGMMTYVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042031SKA1-MBD
IPR009829SKA1