prot_E-siliculosus-1a_F_contig1517.3002.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1517.3002.1
Unique Nameprot_E-siliculosus-1a_F_contig1517.3002.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length123
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1517.3002.1 vs. uniprot
Match: A0A6H5L8F4_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F4_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.620e-65
Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MEGTGGSKGCRCDVDHSVTRLNGLFDMVDGDTCDVTFVVTSVASAPSSSEGLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEAWAGGGGGATGG 123
            MEGTGGSKGCRCDVDHSV RLNGLF+MVD DTCDVTFVVTSVASA SSSEGL+PQPAGTPERARPRTETLEQGSHRGDNCS KNVSGAGIAD+  AGSCENRER RGEGQEAW GGG GATGG
Sbjct:    1 MEGTGGSKGCRCDVDHSVARLNGLFEMVDDDTCDVTFVVTSVASAQSSSEGLLPQPAGTPERARPRTETLEQGSHRGDNCSDKNVSGAGIADNYRAGSCENRERQRGEGQEAWDGGGRGATGG 123
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BLAST of mRNA_E-siliculosus-1a_F_contig1517.3002.1 vs. uniprot
Match: D7FPG9_ECTSI (BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG9_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 4.940e-50
Identity = 92/95 (96.84%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:   27 MVDGDTCDVTFVVTSVASAPSSSEGLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEAWAGGGGGAT 121
            MVDGDTCDVTFVVTSVASAPSSSEGLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEA AGG GG T
Sbjct:    1 MVDGDTCDVTFVVTSVASAPSSSEGLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEALAGGAGGXT 95
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8F4_9PHAE1.620e-6590.24BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPG9_ECTSI4.940e-5096.84BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1517contigE-siliculosus-1a_F_contig1517:30613..30981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1517.3002.1mRNA_E-siliculosus-1a_F_contig1517.3002.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1517 30608..30981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1517.3002.1 ID=prot_E-siliculosus-1a_F_contig1517.3002.1|Name=mRNA_E-siliculosus-1a_F_contig1517.3002.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=123bp
MEGTGGSKGCRCDVDHSVTRLNGLFDMVDGDTCDVTFVVTSVASAPSSSE
GLIPQPAGTPERARPRTETLEQGSHRGDNCSGKNVSGAGIADSDTAGSCE
NRERHRGEGQEAWAGGGGGATGG
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