prot_E-siliculosus-1a_F_contig1508.2959.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1508.2959.1
Unique Nameprot_E-siliculosus-1a_F_contig1508.2959.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length175
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1508.2959.1 vs. uniprot
Match: D7FKB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB9_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 9.320e-101
Identity = 154/164 (93.90%), Postives = 157/164 (95.73%), Query Frame = 0 
Query:    1 MPRTDSADGQGQGDGSTPTAVVAAGCDAGGVEADWEKLEKSEQDVIVPASLFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPSDGTIAPATQSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVHQHWNTY 164
            M RTDSADGQGQGDGSTPTAVVAAGCDAGGVEADWEKLE++EQD IVPASLFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTIS SDGTI  AT SKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDV QHWNT+
Sbjct:    1 MQRTDSADGQGQGDGSTPTAVVAAGCDAGGVEADWEKLEQTEQDFIVPASLFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISFSDGTIDAATHSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHWNTF 164
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BLAST of mRNA_E-siliculosus-1a_F_contig1508.2959.1 vs. uniprot
Match: D8LHA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA7_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.790e-20
Identity = 59/135 (43.70%), Postives = 78/135 (57.78%), Query Frame = 0 
Query:   31 VEADWEKLEKSEQDVIVPASLFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPSDGTIAPATQSKLES-LLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVHQHWNTY 164
            V + W  L  S+ +  VP +LFV+CKTVVEDD G L+LN T+VQRV ++    + P D         +LE  LLF + +KGP  GG I  R   ++D R  S        TV +C +TLDL +APLDV QHWN +
Sbjct:   19 VASKWATLRGSQLEAKVPVALFVLCKTVVEDDQGALYLNATVVQRVPLETTRPMPPQD---------QLEKDLLFEMKVKGPSAGGGITSRRRSVEDVRGRSQP------TVMVC-ETLDLKTAPLDVRQHWNWF 137
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1508.2959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKB9_ECTSI9.320e-10193.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LHA7_ECTSI1.790e-2043.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1508contigE-siliculosus-1a_F_contig1508:18607..23641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1508.2959.1mRNA_E-siliculosus-1a_F_contig1508.2959.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1508 18579..23759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1508.2959.1 ID=prot_E-siliculosus-1a_F_contig1508.2959.1|Name=mRNA_E-siliculosus-1a_F_contig1508.2959.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=175bp
MPRTDSADGQGQGDGSTPTAVVAAGCDAGGVEADWEKLEKSEQDVIVPAS
LFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPSDGTIAPATQSKLE
SLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDL
ISAPLDVHQHWNTYVRISCDRYIP*
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