prot_E-siliculosus-1a_F_contig15024.2928.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig15024.2928.1
Unique Nameprot_E-siliculosus-1a_F_contig15024.2928.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length243
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15024.2928.1 vs. uniprot
Match: Q8QNQ4_ESV1K (EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ4_ESV1K)

HSP 1 Score: 405 bits (1042), Expect = 7.510e-141
Identity = 204/239 (85.36%), Postives = 218/239 (91.21%), Query Frame = 0 
Query:    1 MWKLQKREQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEANVGHGVQGIVYHVINHPDKVVKRYNVRRPEALAFLTTKQFVYDRIAFEQGFGPQIFEISSDGRVIDLPDKSTIPKFEKGLIISVVMERIEEIKGKEELLKNSDGIVGVWKKMRQGGLLNVDGFYAHSSKEKAIVAGDFGGVEVTENDQVFIQKMYEYFDSCNSVGKHDAEIALKYEEEHPTDSFTTEILKPALDKTYGR 239
            MWKLQK+EQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEA+VGHGVQGIVYHVINHPDKVVKRY+VRRP  LAFLTTKQFVYDRIA EQGFGPQI+EISSDGRVIDL DKSTIPKFEKGLIISVVME+IE++  +EELLKNS GIVGVWKKMRQGGLLNVDGFYAHS K+KAIVAGDFG VE   NDQ+FI KMYE+FDSC S+G +D  IALKYE+EHP DSFT  ILKPALDKTY R
Sbjct:   67 MWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEASVGHGVQGIVYHVINHPDKVVKRYSVRRPGTLAFLTTKQFVYDRIACEQGFGPQIYEISSDGRVIDLSDKSTIPKFEKGLIISVVMEKIEKMTDQEELLKNSGGIVGVWKKMRQGGLLNVDGFYAHSLKQKAIVAGDFGVVEEATNDQMFIDKMYEFFDSCLSIGANDPGIALKYEKEHPEDSFTKLILKPALDKTYRR 305
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15024.2928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNQ4_ESV1K7.510e-14185.36EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15024contigE-siliculosus-1a_F_contig15024:267..995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15024.2928.1mRNA_E-siliculosus-1a_F_contig15024.2928.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig15024 267..1019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig15024.2928.1 ID=prot_E-siliculosus-1a_F_contig15024.2928.1|Name=mRNA_E-siliculosus-1a_F_contig15024.2928.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=243bp
MWKLQKREQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEANVGHGVQGIV
YHVINHPDKVVKRYNVRRPEALAFLTTKQFVYDRIAFEQGFGPQIFEISS
DGRVIDLPDKSTIPKFEKGLIISVVMERIEEIKGKEELLKNSDGIVGVWK
KMRQGGLLNVDGFYAHSSKEKAIVAGDFGGVEVTENDQVFIQKMYEYFDS
CNSVGKHDAEIALKYEEEHPTDSFTTEILKPALDKTYGRHNK*
back to top