prot_E-siliculosus-1a_F_contig14981.2890.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig14981.2890.1
Unique Name	prot_E-siliculosus-1a_F_contig14981.2890.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	341

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A0D5M0D4_9GAMM (TRAP dicarboxylate transporter, DctM subunit n=81 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D5M0D4_9GAMM)

HSP 1 Score: 613 bits (1580), Expect = 4.880e-219
Identity = 332/341 (97.36%), Postives = 340/341 (99.71%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGIV+GLSPDMLAT+GTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVS+RYGWEGGTPV+ AE+LSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGA+VGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWI+SLTDNGV+LLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL
Sbjct:   27 LSGAVGIVLGLSPDMLATMGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSKRYGWEGGTPVESAERLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAIVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIVSLTDNGVLLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 367

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A0F9YBA4_9ZZZZ (DctM domain-containing protein n=42 Tax=root TaxID=1 RepID=A0A0F9YBA4_9ZZZZ)

HSP 1 Score: 612 bits (1578), Expect = 9.850e-219
Identity = 333/341 (97.65%), Postives = 340/341 (99.71%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPA++VS+RYGWEGG PV+GAEQLSVR+TFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGA+VGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGV+LLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL
Sbjct:   27 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPALLVSKRYGWEGGKPVEGAEQLSVRSTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGALVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVLLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 367

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: H0IYH5_9GAMM (TRAP dicarboxylate transporter subunit DctM n=13 Tax=Halomonas TaxID=2745 RepID=H0IYH5_9GAMM)

HSP 1 Score: 607 bits (1564), Expect = 1.330e-216
Identity = 329/341 (96.48%), Postives = 338/341 (99.12%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGI+ GLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAG+ALLVPAMIVS+RYGWEGGTPV+GAE LSVRTTFKQA+PALFAPVLILGGLRSGLFTPTEAAVVAVAYG +VGLFLT+ELSLRDLWELLGEAAIISGVVMLII+LAGIFAWAGTMLGTFRHLAEWIISLTDNGV+LLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL
Sbjct:   27 LSGAVGILAGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGMALLVPAMIVSKRYGWEGGTPVEGAELLSVRTTFKQALPALFAPVLILGGLRSGLFTPTEAAVVAVAYGTLVGLFLTKELSLRDLWELLGEAAIISGVVMLIISLAGIFAWAGTMLGTFRHLAEWIISLTDNGVLLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 367

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A3Q8WFC3_9GAMM (TRAP transporter large permease n=9 Tax=Halomonadaceae TaxID=28256 RepID=A0A3Q8WFC3_9GAMM)

HSP 1 Score: 591 bits (1523), Expect = 2.240e-210
Identity = 321/341 (94.13%), Postives = 333/341 (97.65%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            L+G+VGIV GLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIV++RYGWEG TP  GAE L+VRTTF+QA+PALFAPVLILGGLRSGLFTPTEAAVVAVAYG + GLFLT+ELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWII LTDNGV+LL+LVMLAVLVAGMLLDAISIYLIMMP+LIPVMQHFEWNPVWFGILL
Sbjct:   27 LAGSVGIVAGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVAKRYGWEG-TPAVGAETLTVRTTFRQALPALFAPVLILGGLRSGLFTPTEAAVVAVAYGTIAGLFLTKELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIIGLTDNGVLLLVLVMLAVLVAGMLLDAISIYLIMMPVLIPVMQHFEWNPVWFGILL 366

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A2N7TYL1_9GAMM (C4-dicarboxylate ABC transporter n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7TYL1_9GAMM)

HSP 1 Score: 567 bits (1462), Expect = 4.450e-201
Identity = 307/341 (90.03%), Postives = 326/341 (95.60%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGI+IGLSP+MLATLGTNTYNSIAKYPLIAIPLFI+TGLIFER+GVALRLVRFAQALIG RHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGL PGILAGLALLVPA++VS+RYGWEG   +  AEQL V  TFKQA+PALFAPVLILGGLRSGLFTPTEAAVVAVAYG +VGLFLTRE+ L+DLW L GEAA+ISGVVMLII+LAGIFAWAGTMLGTFRHLAEWII L+D+GV+LL+L+MLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL
Sbjct:   27 LSGAVGILIGLSPEMLATLGTNTYNSIAKYPLIAIPLFIMTGLIFERAGVALRLVRFAQALIGQRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLLPGILAGLALLVPALLVSKRYGWEGRHAMPQAEQLKVGETFKQALPALFAPVLILGGLRSGLFTPTEAAVVAVAYGILVGLFLTREIGLKDLWGLFGEAAVISGVVMLIISLAGIFAWAGTMLGTFRHLAEWIIGLSDSGVLLLVLIMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 367

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: W1N8N1_9GAMM (C4-dicarboxylate ABC transporter n=3 Tax=Halomonas TaxID=2745 RepID=W1N8N1_9GAMM)

HSP 1 Score: 544 bits (1402), Expect = 5.360e-192
Identity = 297/341 (87.10%), Postives = 320/341 (93.84%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGI +GLSP+MLATLGTNTYNS+AKYPLIAIPLFILTGLIFER+GVA RLVRFAQALIGPRHGGLA+VAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYP+PFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGL+LL+PA +++RRYGWE   P D  E+  +  +F++AIPALFAPVLILGGLRSGLFTPTEAAVVAVAYG VVGL LTREL+ RDLWELLGEAA+ISGVVMLIIALAGIFAWAGT LGTFRHLAEW+I L+DNG +LL+L+MLAVL AGMLLDAISIYLIMMPILIPVMQHF WNPVWFGILL
Sbjct:   27 LSGAVGIFVGLSPNMLATLGTNTYNSVAKYPLIAIPLFILTGLIFERAGVAARLVRFAQALIGPRHGGLAVVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPRPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLSLLIPAWLLARRYGWED--PHD-VERPPLGESFRKAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGVVVGLALTRELNWRDLWELLGEAAVISGVVMLIIALAGIFAWAGTTLGTFRHLAEWVIGLSDNGALLLVLIMLAVLAAGMLLDAISIYLIMMPILIPVMQHFGWNPVWFGILL 364

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A1B8NWT3_HALEL (Sialic acid TRAP transporter permease protein SiaT n=6 Tax=Halomonas TaxID=2745 RepID=A0A1B8NWT3_HALEL)

HSP 1 Score: 541 bits (1395), Expect = 6.220e-191
Identity = 294/341 (86.22%), Postives = 317/341 (92.96%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            LSGAVGIV GLSP ML+TLGTNTYNS+AKYPLIAIPLFILTGLIFER+GVA RLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMT+AGYP+PFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPG+LAG ALLVPA  ++RRY WE     +  E+  +  +F+QAIPALFAP+LILGGLRSGLFTPTEAAVVAVAYG VVGL+LTREL  RDLWEL GEAA+ISGVVMLIIALAGIFAWAGTMLGTFRH+AEW+I L+DNGV+LL L+MLAVLVAGMLLDAISIYLI+MPILIPVMQHF+WNPVWFGILL
Sbjct:   27 LSGAVGIVAGLSPSMLSTLGTNTYNSVAKYPLIAIPLFILTGLIFERAGVAARLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTRAGYPRPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGMLAGAALLVPAWWLARRYRWEAP---ENVERPPLAESFRQAIPALFAPILILGGLRSGLFTPTEAAVVAVAYGVVVGLWLTRELGWRDLWELFGEAAVISGVVMLIIALAGIFAWAGTMLGTFRHMAEWVIGLSDNGVLLLALIMLAVLVAGMLLDAISIYLILMPILIPVMQHFDWNPVWFGILL 364

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A1M5A3N0_9GAMM (TRAP transporter, DctM subunit n=8 Tax=Halomonas TaxID=2745 RepID=A0A1M5A3N0_9GAMM)

HSP 1 Score: 539 bits (1388), Expect = 7.750e-190
Identity = 291/341 (85.34%), Postives = 320/341 (93.84%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            L+GAVGIV GLSP MLATLGTNTYNS+AKYPLIAIPLFILTGLIFER+GVA RLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMT+AGYP+PFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGL+LLVPA  +SRR+GWE  T V   E+  +  +F+QA+PALFAPV+ILGGLRSGLFTPTEAAVVAVAYG +VG+F+TREL +RDLW+L GEAA ISGVVMLIIALAGIFAWAGTMLGTFRH+AEW+I+L+D+G +LLIL+MLAVL AGMLLDAISIYLI+MPIL+PVMQHF+WNPVWFGILL
Sbjct:   28 LAGAVGIVSGLSPMMLATLGTNTYNSVAKYPLIAIPLFILTGLIFERAGVAARLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTRAGYPRPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLSLLVPAFWLSRRHGWEAPTEV---ERPPLGDSFRQALPALFAPVIILGGLRSGLFTPTEAAVVAVAYGVLVGVFVTRELGMRDLWQLFGEAATISGVVMLIIALAGIFAWAGTMLGTFRHMAEWLIALSDDGTLLLILIMLAVLAAGMLLDAISIYLILMPILVPVMQHFDWNPVWFGILL 365

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BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: A0A139C6J9_9GAMM (TRAP transporter large transmembrane protein n=5 Tax=Oceanospirillales TaxID=135619 RepID=A0A139C6J9_9GAMM)

HSP 1 Score: 538 bits (1387), Expect = 1.020e-189
Identity = 294/341 (86.22%), Postives = 318/341 (93.26%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            L+GAVGIV GLSPDMLA LGTNTYNSIAKYPLIAIPLFILTGLIFER+GVA RLVRFAQALIGPRHGGLALVAVLVC+IMGGMSGSGPADAAAVAMVMLPSMT+AGYP+PFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAG+ALL+PA  +SRR+GWE  + V   E+ ++  +F+QAIPALFAPVLILGGLRSGLFTPTEAAV AVAYG VVGLFLTREL  R+LW L+GEAA ISGVVMLIIALAGIFAWAGTMLGTFRHLAEW+I+L+DNG VLL L+M+AVL+AGMLLDAISIYLI+MPILIPVMQHF WNPVWFGILL
Sbjct:   27 LAGAVGIVTGLSPDMLAALGTNTYNSIAKYPLIAIPLFILTGLIFERAGVAARLVRFAQALIGPRHGGLALVAVLVCLIMGGMSGSGPADAAAVAMVMLPSMTRAGYPRPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGVALLLPAFWLSRRHGWEAPSEV---ERPALGESFRQAIPALFAPVLILGGLRSGLFTPTEAAVAAVAYGVVVGLFLTRELDWRELWRLVGEAATISGVVMLIIALAGIFAWAGTMLGTFRHLAEWLITLSDNGAVLLTLIMIAVLLAGMLLDAISIYLILMPILIPVMQHFGWNPVWFGILL 364

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Match: F6AIC0_PSEF1 (TRAP dicarboxylate transporter, DctM subunit n=7 Tax=Pseudomonas TaxID=286 RepID=F6AIC0_PSEF1)

HSP 1 Score: 538 bits (1387), Expect = 1.060e-189
Identity = 289/341 (84.75%), Postives = 314/341 (92.08%), Query Frame = 0

Query:    1 LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGVALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAAGLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPALFAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGEAAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVMLAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL 341
            L+GA+GIV GLSPDMLATLGTNTYNS+AKYPLIAIPLFILTGL+FE++GVA+RLVRFAQA+IGPRHGGLA+VAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSAT+IAASASTAILIPPS+ALILYSIVVPGVDLRALFAAGLFPGILAGL LL+P  ++SRRYGWE      G E+  +  +FK A+PALFAP+LILGGLRSGLFTPTEAAV AVAYG +VGLFLTREL  R LW L GEAA+ISGVVMLIIALAGIFAWAGTMLGTFRHLAEW+ISL+DNG  LLILVMLAVL+ GMLLDAISIYLI+MPILIPVMQHF WNPVWFGILL
Sbjct:   27 LAGAIGIVAGLSPDMLATLGTNTYNSVAKYPLIAIPLFILTGLVFEKAGVAVRLVRFAQAVIGPRHGGLAMVAVLVCMIMGGMSGSGPADAAAVAMVMLPSMTKAGYPKPFSATVIAASASTAILIPPSIALILYSIVVPGVDLRALFAAGLFPGILAGLTLLLPVWLISRRYGWEAP---QGEERPPLWASFKDALPALFAPILILGGLRSGLFTPTEAAVAAVAYGILVGLFLTRELDWRSLWRLCGEAAVISGVVMLIIALAGIFAWAGTMLGTFRHLAEWMISLSDNGTTLLILVMLAVLLVGMLLDAISIYLILMPILIPVMQHFGWNPVWFGILL 364

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig14981.2890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D5M0D4_9GAMM	4.880e-219	97.36	TRAP dicarboxylate transporter, DctM subunit n=81 ...	[more]
A0A0F9YBA4_9ZZZZ	9.850e-219	97.65	DctM domain-containing protein n=42 Tax=root TaxID...	[more]
H0IYH5_9GAMM	1.330e-216	96.48	TRAP dicarboxylate transporter subunit DctM n=13 T...	[more]
A0A3Q8WFC3_9GAMM	2.240e-210	94.13	TRAP transporter large permease n=9 Tax=Halomonada...	[more]
A0A2N7TYL1_9GAMM	4.450e-201	90.03	C4-dicarboxylate ABC transporter n=1 Tax=Halomonas...	[more]
W1N8N1_9GAMM	5.360e-192	87.10	C4-dicarboxylate ABC transporter n=3 Tax=Halomonas...	[more]
A0A1B8NWT3_HALEL	6.220e-191	86.22	Sialic acid TRAP transporter permease protein SiaT...	[more]
A0A1M5A3N0_9GAMM	7.750e-190	85.34	TRAP transporter, DctM subunit n=8 Tax=Halomonas T...	[more]
A0A139C6J9_9GAMM	1.020e-189	86.22	TRAP transporter large transmembrane protein n=5 T...	[more]
F6AIC0_PSEF1	1.060e-189	84.75	TRAP dicarboxylate transporter, DctM subunit n=7 T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit	PFAM	PF06808	DctM	coord: 12..340 e-value: 6.6E-82 score: 275.6
IPR004681	TRAP transporter large membrane protein DctM	TIGRFAM	TIGR00786	TIGR00786	coord: 7..340 e-value: 6.4E-89 score: 296.5
IPR004681	TRAP transporter large membrane protein DctM	PANTHER	PTHR33362	FAMILY NOT NAMED	coord: 11..340
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 144..164
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 293..318
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 274..292
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 215..219
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..239
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 196..214
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 108..113
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..65
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 240..250
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 139..143
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..90
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 251..273
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 319..341
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 165..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 114..138
None	No IPR available	TMHMM	TMhelix		coord: 117..139
None	No IPR available	TMHMM	TMhelix		coord: 313..332
None	No IPR available	TMHMM	TMhelix		coord: 213..235
None	No IPR available	TMHMM	TMhelix		coord: 146..168
None	No IPR available	TMHMM	TMhelix		coord: 284..306
None	No IPR available	TMHMM	TMhelix		coord: 247..269
None	No IPR available	TMHMM	TMhelix		coord: 67..89
None	No IPR available	TMHMM	TMhelix		coord: 32..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig14981	contig	E-siliculosus-1a_F_contig14981:3..1025 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig14981.2890.1	mRNA_E-siliculosus-1a_F_contig14981.2890.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig14981 3..1025 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14981.2890.1 ID=prot_E-siliculosus-1a_F_contig14981.2890.1|Name=mRNA_E-siliculosus-1a_F_contig14981.2890.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=341bp
LSGAVGIVIGLSPDMLATLGTNTYNSIAKYPLIAIPLFILTGLIFERSGV
ALRLVRFAQALIGPRHGGLALVAVLVCMIMGGMSGSGPADAAAVAMVMLP
SMTKAGYPKPFSATLIAASASTAILIPPSVALILYSIVVPGVDLRALFAA
GLFPGILAGLALLVPAMIVSRRYGWEGGTPVDGAEQLSVRTTFKQAIPAL
FAPVLILGGLRSGLFTPTEAAVVAVAYGAVVGLFLTRELSLRDLWELLGE
AAIISGVVMLIIALAGIFAWAGTMLGTFRHLAEWIISLTDNGVVLLILVM
LAVLVAGMLLDAISIYLIMMPILIPVMQHFEWNPVWFGILL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004681	TRAP_DctM
IPR010656	DctM