prot_E-siliculosus-1a_F_contig14974.2888.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14974.2888.1
Unique Nameprot_E-siliculosus-1a_F_contig14974.2888.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length342
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14974.2888.1 vs. uniprot
Match: UPI001D0AE8B7 (BapA prefix-like domain-containing protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0AE8B7)

HSP 1 Score: 60.1 bits (144), Expect = 3.640e-6
Identity = 109/268 (40.67%), Postives = 128/268 (47.76%), Query Frame = 0 
Query:    1 LSPLLGSTFSPDDPNGLDELDNLLQGVAGNVGDLLDPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLLDEGGHLDELLGTLLGEGGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILSELLXXXXXXXXXXXXXXXXXLGENDDLLGGXLGGNGSLNXXXXXXXXXXXXXXXXXXXXXXXFDAGEELIVGLLSELANALGLDLGDLIDAELLAQLIGADGIVN 268
            LSPLLG  F+PDDPNGLDELD L+  VA  +G LLDP+                                                    L+ E G LD LL TLLG+G L+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +L+ LL           XXX   LG++   L G L  NG++                         +  + L V L  ELA +LGLDLGDL+  ELL  L+   G V+
Sbjct:  438 LSPLLGREFTPDDPNGLDELDGLVGEVADQLGVLLDPVIAPLLGEGLSEAVFDAIGLQVDYATDSITNLLQDGLLGGVLAGLGLAGTMEGLIGEDGQLDALLQTLLGDGSLIAGTLTEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQGSVLNSLLSALLDDQEVLGXXXSGVLGDDGGALSGLLR-NGAMEGLLDESGLLAMILGSQGVLG----EVIDTLEVSL-GELAASLGLDLGDLLGGELLPGLLNEGGAVD 699
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14974.2888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001D0AE8B73.640e-640.67BapA prefix-like domain-containing protein n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14974contigE-siliculosus-1a_F_contig14974:3..1028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14974.2888.1mRNA_E-siliculosus-1a_F_contig14974.2888.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14974 3..1028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14974.2888.1 ID=prot_E-siliculosus-1a_F_contig14974.2888.1|Name=mRNA_E-siliculosus-1a_F_contig14974.2888.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=342bp
LSPLLGSTFSPDDPNGLDELDNLLQGVAGNVGDLLDPILGPLLGEGLAET
IFNELGLQVDYATDAIVNLLTDGFLGGVLAGLGLGDILNDLLDEGGHLDE
LLGTLLGEGGLVGGLLAEEGLIGGLLAEHGIIGNLLADNGTLALLLGDDG
LLGSLLNDGGILSELLGSLLADESLLGQLLGGLLGENDDLLGGLLGGNGS
LNGLLLDEDGLLAALIGSQGILGGLFDAGEELIVGLLSELANALGLDLGD
LIDAELLAQLIGADGIVNELMDALVGPEGLLTELLGQEGIAGNLLEGLLN
EDGPLADVINQLVGENGLLTQVLAGLPSEQLESLLDGLLGDD
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