prot_E-siliculosus-1a_F_contig14959.2880.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14959.2880.1
Unique Nameprot_E-siliculosus-1a_F_contig14959.2880.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length238
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14959.2880.1 vs. uniprot
Match: D7G8E4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E4_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 1.320e-112
Identity = 215/239 (89.96%), Postives = 221/239 (92.47%), Query Frame = 0 
Query:    1 MKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATAVGRGGERARMSAAAQTVQVAFRQRMFHRFVWAQTYLRGPTHAYEVFKRCLPMPRGXXXXXXXXXXXXXXXXXXPPAALADVASAAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRSSTRESSDISFSSATSTP-EEGTQTGKTPPTASASTGAGVSSPGRPXXXXXXXXXXXXXXXXNPDFAEAFERKYHIRTAAV 238
            MKKVLRTATEAYSDRVG+QGGGATRINANR+ GAGCGATAVGRGGERARMSAAAQTVQVAFRQRMFHRFVWAQ YLRGPTHAYEVFKRCLPMPRG XXXXXXXXXXXXXXXX  PAALADVASAAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRS T +S DISFSSAT+T  EEGT+TGKTPPTASASTGAGVSSPGRPXXXXXXXXX       N +FAEAFERKYHIRTAAV
Sbjct:  271 MKKVLRTATEAYSDRVGKQGGGATRINANRQSGAGCGATAVGRGGERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCLPMPRGGXXXXXXXXXXXXXXXXLRPAALADVASAAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRSCTPKSYDISFSSATTTTQEEGTETGKTPPTASASTGAGVSSPGRPXXXXXXXXX-------NQEFAEAFERKYHIRTAAV 502
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14959.2880.1 vs. uniprot
Match: A0A6H5L1Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z0_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 5.700e-111
Identity = 205/250 (82.00%), Postives = 210/250 (84.00%), Query Frame = 0 
Query:    1 MKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATAVGRGGERARMSAAAQTVQVAFRQRMFHRFVWAQTYLRGPTHAYEVFKRCLPMPRGXXXXXXXXXXXXXXXXXXPP------------AALADVASAAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRSSTRESSDISFSSATSTPEEGTQTGKTPPTASASTGAGVSSPGRPXXXXXXXXXXXXXXXXNPDFAEAFERKYHIRTAAV 238
            MKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATAVG GGERARMSAAAQTVQVAFRQRMFHRFVWAQ YLRGPTHAYEVFKRCLPMPRGXXXXXXXXXXXXXXXXXX               ALADVASAAVNLVDAWPELPGFCPSFPHHVH+ADPIFLRYLRS TRESS ISFSSAT+T EEG  TG+ PPTASASTGAGVSSPGRP                NP+F EAFERKY+IRTAAV
Sbjct:  101 MKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATAVGTGGERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCLPMPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQSTALADVASAAVNLVDAWPELPGFCPSFPHHVHSADPIFLRYLRSCTRESSGISFSSATTTAEEGAATGRAPPTASASTGAGVSSPGRPPQQTQQQQH-------NPEFGEAFERKYNIRTAAV 343
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14959.2880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8E4_ECTSI1.320e-11289.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1Z0_9PHAE5.700e-11182.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14959contigE-siliculosus-1a_F_contig14959:2..715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14959.2880.1mRNA_E-siliculosus-1a_F_contig14959.2880.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14959 2..1026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14959.2880.1 ID=prot_E-siliculosus-1a_F_contig14959.2880.1|Name=mRNA_E-siliculosus-1a_F_contig14959.2880.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=238bp
MKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATAVGRGGERARM
SAAAQTVQVAFRQRMFHRFVWAQTYLRGPTHAYEVFKRCLPMPRGGGGGN
FASAATPHHPPPLPPAALADVASAAVNLVDAWPELPGFCPSFPHHVHAAD
PIFLRYLRSSTRESSDISFSSATSTPEEGTQTGKTPPTASASTGAGVSSP
GRPPQPTQQQQQQQQQQQQNPDFAEAFERKYHIRTAAV
back to top