prot_E-siliculosus-1a_F_contig14945.2875.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14945.2875.1
Unique Nameprot_E-siliculosus-1a_F_contig14945.2875.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length73
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A2A3XD60_9GAMM (META domain-containing protein n=1 Tax=Halomonas sp. JB37 TaxID=2024405 RepID=A0A2A3XD60_9GAMM)

HSP 1 Score: 120 bits (301), Expect = 2.580e-33
Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCTAAMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +K  LA  WLT TLLITAGCTAAM+TQPPATMPNESLINTYWKL TLGDQ VVTRENVREAHLVLHQD
Sbjct:    1 MKHPLARYWLTGTLLITAGCTAAMNTQPPATMPNESLINTYWKLATLGDQSVVTRENVREAHLVLHQD 68          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A2G2KTS8_HALSX (META domain-containing protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A2G2KTS8_HALSX)

HSP 1 Score: 86.3 bits (212), Expect = 9.160e-20
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    3 NNTLKRQLALSWLTSTLLITAGCTAA-MDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            N+ LKR+L      S LLITAGC++A MDT   A  PNE+LINTYWKLVTL   PVVT EN REAHLVLHQ+
Sbjct:    3 NHALKRRLPNYGFISALLITAGCSSATMDTHETAHHPNEALINTYWKLVTLDGAPVVTHENFREAHLVLHQE 74          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A0C3IEL5_9GAMM (META domain-containing protein n=10 Tax=Halomonadaceae TaxID=28256 RepID=A0A0C3IEL5_9GAMM)

HSP 1 Score: 80.9 bits (198), Expect = 9.060e-18
Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   17 STLLITAGCTAA-MDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            S LLITAGC++A MDT   A  PNE LINTYWKLVTL   PVVT EN REAHLVLHQ+
Sbjct:    6 SALLITAGCSSATMDTHETAHRPNEPLINTYWKLVTLDGAPVVTHENFREAHLVLHQE 63          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A1J8P8J2_9GAMM (META domain-containing protein n=4 Tax=Halomonadaceae TaxID=28256 RepID=A0A1J8P8J2_9GAMM)

HSP 1 Score: 81.3 bits (199), Expect = 1.030e-17
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 IRNNTLKRQLALSWLTSTLLITAGC-TAAMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +RN  LKR LA+S     LL+T+GC  AA D+    T P+ESLINTYWKLV L   PVVT E+ REAHLVLHQ+
Sbjct:   10 LRNRKLKRLLAISVFIGILLMTSGCIVAATDSHKYTTSPDESLINTYWKLVMLDGAPVVTHEDFREAHLVLHQE 83          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: UPI001CF4FE01 (META domain-containing protein n=1 Tax=Halomonas sp. SBBP1 TaxID=2599306 RepID=UPI001CF4FE01)

HSP 1 Score: 80.5 bits (197), Expect = 1.480e-17
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCTAAMDTQPPATM-PNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR+LAL      LLITAGC++A    P  T  P+E LINTYWKLVTL  +PVVT EN REAH+VLHQD
Sbjct:    1 MKRRLALYGFIGALLITAGCSSAPIDSPDGTYHPDEPLINTYWKLVTLDGEPVVTDENFREAHVVLHQD 69          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: UPI001F2ACC8E (META domain-containing protein n=1 Tax=Halomonas titanicae TaxID=664683 RepID=UPI001F2ACC8E)

HSP 1 Score: 79.7 bits (195), Expect = 2.960e-17
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCT-AAMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR+LAL      LLITAGC+ AAMD+Q  A  P+E+LINTYWKLV+L   PVV   N REAH VLHQD
Sbjct:    1 MKRRLALYGFIGALLITAGCSSAAMDSQETAHHPDETLINTYWKLVSLDGAPVVVNGNFREAHFVLHQD 69          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: UPI001EEFF2D9 (META domain-containing protein n=1 Tax=Halomonas profundi TaxID=2852117 RepID=UPI001EEFF2D9)

HSP 1 Score: 79.0 bits (193), Expect = 5.930e-17
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCTAAM-DTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR LA S   S LLITAGCTAA  D       P++SLINTYWKLVTL D+ ++T+EN REAH VLHQ+
Sbjct:    1 MKRLLAFSICISALLITAGCTAASTDNAKSNERPDKSLINTYWKLVTLDDKQIITQENSREAHFVLHQE 69          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: UPI0017884C65 (META domain-containing protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI0017884C65)

HSP 1 Score: 74.3 bits (181), Expect = 3.790e-15
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCT-AAMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR LA     S LL+T GCT A+ D    +  P+ESLINTYWKLV L D+ ++T+EN REAH VLHQ+
Sbjct:    1 MKRLLAFPIFISALLLTTGCTTASTDNAKNSERPDESLINTYWKLVALDDKQIITQENSREAHFVLHQE 69          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A265E0A7_9GAMM (META domain-containing protein n=1 Tax=Halomonas boliviensis LC1 TaxID=1072583 RepID=A0A265E0A7_9GAMM)

HSP 1 Score: 72.8 bits (177), Expect = 1.510e-14
Identity = 42/69 (60.87%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCT-AAMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR LA+     TLLIT G T AAMD Q  A  P+E LINTYW+L  L    VVT EN REAHLVLHQD
Sbjct:    1 MKRLLAICVFIGTLLITTGYTLAAMDFQKSAASPDEPLINTYWQLAWLDGALVVTHENFREAHLVLHQD 69          
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Match: A0A1A9R6C8_9GAMM (META domain-containing protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9R6C8_9GAMM)

HSP 1 Score: 69.3 bits (168), Expect = 3.390e-13
Identity = 38/69 (55.07%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    6 LKRQLALSWLTSTLLITAGCTA-AMDTQPPATMPNESLINTYWKLVTLGDQPVVTRENVREAHLVLHQD 73
            +KR LA+     TLLI  GCT  A   Q  +   +E L+NTYWKL  L   PVVT EN REAHLVLHQD
Sbjct:    1 MKRLLAICGFIGTLLIFVGCTVDATKAQGASATLDEPLVNTYWKLTKLNGAPVVTHENFREAHLVLHQD 69          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14945.2875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2A3XD60_9GAMM2.580e-3386.76META domain-containing protein n=1 Tax=Halomonas s... [more]
A0A2G2KTS8_HALSX9.160e-2065.28META domain-containing protein n=2 Tax=Halomonas T... [more]
A0A0C3IEL5_9GAMM9.060e-1872.41META domain-containing protein n=10 Tax=Halomonada... [more]
A0A1J8P8J2_9GAMM1.030e-1759.46META domain-containing protein n=4 Tax=Halomonadac... [more]
UPI001CF4FE011.480e-1762.32META domain-containing protein n=1 Tax=Halomonas s... [more]
UPI001F2ACC8E2.960e-1762.32META domain-containing protein n=1 Tax=Halomonas t... [more]
UPI001EEFF2D95.930e-1760.87META domain-containing protein n=1 Tax=Halomonas p... [more]
UPI0017884C653.790e-1555.07META domain-containing protein n=2 Tax=unclassifie... [more]
A0A265E0A7_9GAMM1.510e-1460.87META domain-containing protein n=1 Tax=Halomonas b... [more]
A0A1A9R6C8_9GAMM3.390e-1355.07META domain-containing protein n=2 Tax=unclassifie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14945contigE-siliculosus-1a_F_contig14945:1..219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14945.2875.1mRNA_E-siliculosus-1a_F_contig14945.2875.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14945 1..219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14945.2875.1 ID=prot_E-siliculosus-1a_F_contig14945.2875.1|Name=mRNA_E-siliculosus-1a_F_contig14945.2875.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=73bp
IRNNTLKRQLALSWLTSTLLITAGCTAAMDTQPPATMPNESLINTYWKLV
TLGDQPVVTRENVREAHLVLHQD
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