prot_E-siliculosus-1a_F_contig149.2855.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig149.2855.1
Unique Nameprot_E-siliculosus-1a_F_contig149.2855.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length362
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 1.250e-143
Identity = 318/511 (62.23%), Postives = 326/511 (63.80%), Query Frame = 0
Query:    2 RRSFNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFALGETRQEERQQGAAGLQTAAAAGTGLRMARPTSSLSSSGTGRRVYSCGPGGXXXXXXXXXXXXXTLTPSLASSSYTPPGDSSNAEINPRAGFFATYPDGSAPNGHGSMGTFASSSPSLCAPWADHGGFYPADGFPGSEEAGGSGAGVSGGFXXXXXXXXXXXXX------------QNWAST-----------------------------------------------------------------------------------------------------------------------QQQ--------------------EDHMPGFSEGVWYHQQQGPQTLPQEGFGQVDDWLNSPYLLGIDEIGGGHDPDGAVECAARNAATDVDNLGIL 361
            RRSFNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASAAPXXXXXXXXXXXXXXXXXXXXXXX       ALGETRQ    QGAAGLQTAAAAGTGLRMARPTSSLSSSGT R  Y+CGP  XXXXXXXXXXXX TL+PSLASSSYTPPGDSSNAEINPRAG+F  YPDGS PN H +MGTFASSSPSLCAP A++GGF+PADGF G E+AG SGAGVSGGFXXXXXXXXXXXXX            QNWAST                                                                                                                        QQ                    E HMPGFSE VWYHQQQGPQTL QEGFGQVDDWLNSPYLL  DEIGGGHD DGAVE AARNAATDVDNLGIL
Sbjct:    2 RRSFNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASAAPXXXXXXXXXXXXXXXXXXXXXXXDAIFV--ALGETRQ----QGAAGLQTAAAAGTGLRMARPTSSLSSSGTDRGAYACGPXXXXXXXXXXXXXXATLSPSLASSSYTPPGDSSNAEINPRAGYFVAYPDGSVPNSHEAMGTFASSSPSLCAPLANYGGFFPADGFTGPEQAGESGAGVSGGFXXXXXXXXXXXXXXXXXXXXXXXXXQNWASTVRGSECTDGSYQSHTSWCSAPQSPLSSPYIMSASSLGSVGPPPAAPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAATGGXXXXXXXXLNPLGGGKCGYGSTQQLLQLQLXXXXXXXXXXXXXXEHHMPGFSESVWYHQQQGPQTLRQEGFGQVDDWLNSPYLLREDEIGGGHDLDGAVEGAARNAATDVDNLGIL 506          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: D7G094_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G094_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 4.480e-38
Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
Query:  293 MPGFSEGVWYHQQQGPQTLPQEGFGQVDDWLNSPYLLGIDEIGGGHDPDGAVECAARNAATDVDNLGIL 361
            MP FSEGVWYHQQQGPQTLPQEGFG VDDWLNSPYLLG DEIGG HDPDGAVECAARN+ATDVDNLGIL
Sbjct:    1 MPDFSEGVWYHQQQGPQTLPQEGFGHVDDWLNSPYLLGEDEIGGRHDPDGAVECAARNSATDVDNLGIL 69          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.820e-14
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    6 NNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASA 83
            N G+WT+EEH+AFL GL  H  N   + P   TRSA+Q+RTH QKYF K+++GE+FP +PY S +  A  ++  +  A
Sbjct:    7 NKGKWTREEHEAFLSGLWQHESNSHALVP---TRSALQIRTHAQKYFDKIERGEKFPAQPYPSQYDAASGKSCIARGA 81          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.870e-14
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    6 NNGRWTKEEHDAFLQGLVLHGKN-WDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASA 83
            N GRWT EEHDAFL+G+    +N W  IA ++ TR+ +Q+RTH QKY+ KVDKGE FP+EPY S    A  ++ +SA A
Sbjct:    6 NKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSASAGA 84          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: A0A1E7FKC4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKC4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.430e-13
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    9 RWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDK 57
            RWTKEEHDAFL GL ++GK W  +A  VKTR+ VQ RTH QKYF+K+ K
Sbjct:    1 RWTKEEHDAFLSGLKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLSK 49          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 9.850e-13
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 FRRSFNNGRWTKEEHDAFLQGLVLHGKN-WDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEE 64
            FR   N GRWT EEH AFL+G+    +N W  IA ++ TR+ +Q+RTH QKY+ KVDKGE FP+E
Sbjct:    6 FRIRRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDE 70          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 4.640e-12
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    6 NNGRWTKEEHDAFLQGLVLHGKN-WDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASA 83
            N GRWT EEH  FL+G+ L  ++  + +A ++ TR+ +QVRTH QKYF KVDKGE FP EPY S + +A  +   +A A
Sbjct:    6 NKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYDRAAGRAGVAAGA 84          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: D7G4K1_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K1_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 6.230e-12
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    8 GRWTKEEHDAFLQGLVLHGKNW-DLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASAAP 85
            GRWTK+EH  FL GL   GK+W ++    V +R+A Q+RTH QKYF KV++G+ FPE+PYES  +  +  T    S +P
Sbjct:   57 GRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYES--VPGKRNTCDDRSGSP 133          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.520e-12
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    6 NNGRWTKEEHDAFLQGLVLHGKN-WDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKARHQTLSSASA 83
            N GRWT EEH  FL+G+ L  ++  + +A ++ TR+ +QVRTH QKYF KVDKGE FP EPY S + +A  +   +A A
Sbjct:    6 NKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQYDRAAGRAGVAAGA 84          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Match: A0A7S2UVK9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.460e-12
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    6 NNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDK 57
            ++GRWT EEH+ FL+GL LHGK W  IA ++KTR+ +Q+RTH QKYF+K++K
Sbjct:   53 SSGRWTAEEHEIFLRGLDLHGKGWKEIAKMIKTRTVIQIRTHAQKYFQKLEK 104          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC35_9PHAE1.250e-14362.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G094_ECTSI4.480e-3892.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPL1_ECTSI2.820e-1447.44HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5L149_9PHAE2.870e-1453.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E7FKC4_9STRA4.430e-1365.31Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
D7FXJ4_ECTSI9.850e-1355.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXQ4_ECTSI4.640e-1249.37HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7G4K1_ECTSI6.230e-1248.10Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KVV5_9PHAE7.520e-1249.37HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S2UVK9_9STRA8.460e-1259.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 6..54
e-value: 6.1E-12
score: 55.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 8..51
e-value: 7.2E-11
score: 42.1
NoneNo IPR availableGENE3D1.10.10.60coord: 9..56
e-value: 4.4E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 8..186
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 9..54
e-value: 2.3E-8
score: 32.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 2..56
score: 17.031
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 4..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig149contigE-siliculosus-1a_F_contig149:55768..58671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig149.2855.1mRNA_E-siliculosus-1a_F_contig149.2855.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig149 55768..58671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig149.2855.1 ID=prot_E-siliculosus-1a_F_contig149.2855.1|Name=mRNA_E-siliculosus-1a_F_contig149.2855.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=362bp
FRRSFNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQK
YFKKVDKGERFPEEPYESMFIKARHQTLSSASAAPMPPPLVASGGRRQQQ
QQRHQQQDEQDAIFFALGETRQEERQQGAAGLQTAAAAGTGLRMARPTSS
LSSSGTGRRVYSCGPGGAGAGGGSGSGSSATLTPSLASSSYTPPGDSSNA
EINPRAGFFATYPDGSAPNGHGSMGTFASSSPSLCAPWADHGGFYPADGF
PGSEEAGGSGAGVSGGFGGGGGGGGGGGGGQNWASTQQQEDHMPGFSEGV
WYHQQQGPQTLPQEGFGQVDDWLNSPYLLGIDEIGGGHDPDGAVECAARN
AATDVDNLGIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR001005SANT/Myb