prot_E-siliculosus-1a_F_contig14885.2841.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14885.2841.1
Unique Nameprot_E-siliculosus-1a_F_contig14885.2841.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length39
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 9.380e-10
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            GNY EA+PLY R+QAIR+K+LGPDHP VA  LN+ AGLL
Sbjct:  206 GNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLL 244          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.330e-9
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            GNYD+A  LY+R+ AIREK+LGPDHP VA SLN+ AGLL
Sbjct:  130 GNYDQAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: UPI0010816EB9 (tetratricopeptide repeat protein n=1 Tax=Candidatus Chloroploca sp. M50-1 TaxID=2528176 RepID=UPI0010816EB9)

HSP 1 Score: 59.7 bits (143), Expect = 2.490e-9
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGL 38
            GNYD A PLY RA AIRE++LGP+HP  A SLN+LAGL
Sbjct:    9 GNYDAARPLYERALAIRERVLGPEHPDTATSLNNLAGL 46          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.350e-9
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            G YD+AEPL  R+Q IREK+LGP+HP VA SLN+ AGLL
Sbjct:  499 GKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLL 537          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A6H5KMK1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.130e-8
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            G Y EAEPLY R+QAIREK+LG +HP+VA SLN  A LL
Sbjct:   15 GKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLL 53          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A6H5JSR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR2_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.220e-8
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    3 YDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            YDEAEPLY R+QAIREK LGP HP VA SLN  A LL
Sbjct:    2 YDEAEPLYERSQAIREKALGPKHPDVARSLNKRAWLL 38          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A3D2VY52_9GAMM (CHAT domain-containing protein (Fragment) n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VY52_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 7.740e-8
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGL 38
            G Y EAEPL+RRA A+REKMLGP+HP    S+N+LA L
Sbjct:    6 GRYREAEPLFRRALAVREKMLGPEHPNTLTSINNLAFL 43          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: X0XF05_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XF05_9ZZZZ)

HSP 1 Score: 54.7 bits (130), Expect = 1.100e-7
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLA 36
            G+Y +AEPLY+RA AI EK LGP+HP VA SLN+LA
Sbjct:    9 GDYSKAEPLYKRALAIMEKALGPEHPDVATSLNNLA 44          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: A0A3D2VX06_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VX06_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.340e-7
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGL 38
            G Y EAEPLYRRA A REK+LG +HP   +S N+LAGL
Sbjct:    6 GRYGEAEPLYRRALAAREKVLGTEHPDTLSSANNLAGL 43          
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Match: UPI001A9BC8CA (Tetratricopeptide repeat-containing protein n=2 Tax=Desulfonema magnum TaxID=45655 RepID=UPI001A9BC8CA)

HSP 1 Score: 54.3 bits (129), Expect = 1.990e-7
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL 39
            G+Y+ AEPL+RRA  IREK+LG DH   A SLN+LAGLL
Sbjct:    7 GDYEGAEPLFRRALEIREKVLGADHSDTATSLNNLAGLL 45          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14885.2841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5H9_9PHAE9.380e-1071.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWM2_9PHAE2.330e-971.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0010816EB92.490e-971.05tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
A0A6H5KIY6_9PHAE6.350e-969.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK1_9PHAE2.130e-869.23Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JSR2_9PHAE2.220e-875.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3D2VY52_9GAMM7.740e-865.79CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
X0XF05_9ZZZZ1.100e-769.44Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A3D2VX06_9GAMM1.340e-765.79Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
UPI001A9BC8CA1.990e-766.67Tetratricopeptide repeat-containing protein n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..38
e-value: 2.4E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..38
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..38
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..39
e-value: 5.5E-14
score: 53.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14885contigE-siliculosus-1a_F_contig14885:208..324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14885.2841.1mRNA_E-siliculosus-1a_F_contig14885.2841.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14885 208..324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14885.2841.1 ID=prot_E-siliculosus-1a_F_contig14885.2841.1|Name=mRNA_E-siliculosus-1a_F_contig14885.2841.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=39bp
GNYDEAEPLYRRAQAIREKMLGPDHPKVAASLNSLAGLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf