prot_E-siliculosus-1a_F_contig1483.2816.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1483.2816.1
Unique Nameprot_E-siliculosus-1a_F_contig1483.2816.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length138
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1483.2816.1 vs. uniprot
Match: A0A6H5JH87_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH87_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 6.930e-58
Identity = 123/137 (89.78%), Postives = 127/137 (92.70%), Query Frame = 0 
Query:    1 EEAEGWERPSLSQRLARGVPVLGATGLWQLLSRLDGPPSLLDPLAAVLSWFFLELIMVSVPTGVWNRWDMGNPGRAASXXXXXXXXXXXXXXXXXXXXXXRLMLGSSREDRDGESKERAEPTTGAATSPLRWDATVQ 137
            EE +GWERPSLSQRLARGVPVLGATGLWQLLSRLDGPPSLLDPLAAVLSWFFLELIMVSVP+GVWN+WDMGNPGRAA XXXXXXXXXXXXXXXXXXX      LGSSRED  GESKERA+PTTGAATSPLRWDATVQ
Sbjct:   98 EEEKGWERPSLSQRLARGVPVLGATGLWQLLSRLDGPPSLLDPLAAVLSWFFLELIMVSVPSGVWNKWDMGNPGRAAXXXXXXXXXXXXXXXXXXXX----XXLGSSREDEQGESKERAKPTTGAATSPLRWDATVQ 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1483.2816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH87_9PHAE6.930e-5889.78Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1483contigE-siliculosus-1a_F_contig1483:6586..7352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1483.2816.1mRNA_E-siliculosus-1a_F_contig1483.2816.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1483 6586..7352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1483.2816.1 ID=prot_E-siliculosus-1a_F_contig1483.2816.1|Name=mRNA_E-siliculosus-1a_F_contig1483.2816.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=138bp
EEAEGWERPSLSQRLARGVPVLGATGLWQLLSRLDGPPSLLDPLAAVLSW
FFLELIMVSVPTGVWNRWDMGNPGRAASAAAAAAAAAAAAAAPETPPPPP
RLMLGSSREDRDGESKERAEPTTGAATSPLRWDATVQG
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