prot_E-siliculosus-1a_F_contig14827.2814.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14827.2814.1
Unique Nameprot_E-siliculosus-1a_F_contig14827.2814.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length224
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.160e-26
Identity = 68/133 (51.13%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 FQGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQ 133
            FQGKYEEA+PLY R+  I EK LGP+HP +A  LNN+                             KMFLR+L FDSQ EIRLYHA                   AIKEKVLGPDHPSLATTLNNRAGLLE Q
Sbjct:    6 FQGKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKAATGVSCGVKLISQLLGGVVE--------KMFLRDLIFDSQTEIRLYHA-------------------AIKEKVLGPDHPSLATTLNNRAGLLEAQ 111          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 4.020e-25
Identity = 99/186 (53.23%), Postives = 110/186 (59.14%), Query Frame = 0
Query:    1 FQGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRG-----------------------------------------------------GGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQ 133
            FQGKYEEA PLYERS AIREKVLGP+HPDVAQSLNNR                                                        XXXXXXXXXXXXXXXXXXXXXXXXX        +   Q ++ LY AV+C++GKY++AEPLYERCQAI EK LGP+HP +ATTLNNRAGLLE Q
Sbjct:  797 FQGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAXATPSTVPQLKLLLYCAVNCIKGKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.720e-24
Identity = 85/135 (62.96%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    1 FQGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQVR 135
            FQGKY++A PLY+RS AI EKV GP+HPDVAQSLNNR        XXXXXXXXXXXXXXXXXXXX    L +    ++AE+         QGKY +AEPL ER Q I+EKVLGP+HP +A +LNNRAGLLE QVR
Sbjct:  415 FQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAE-LLRAQXXXXXXXXXXXXXXXXXXXXXXXXLESQLLSNRAELLR------AQGKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQVR 542          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.750e-22
Identity = 60/117 (51.28%), Postives = 66/117 (56.41%), Query Frame = 0
Query:   17 AIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQ 133
            AIREKVLGPEHPDVA SLNNR G                          +   +  L  DS          HC+QGKYSEAEPLY+RCQA+K K LGP+HPSLA TLNNRA LL  Q
Sbjct:  136 AIREKVLGPEHPDVAASLNNRAG------------------LLRKCFSTIPFTIFTLKHDSS------RYPHCIQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQ 228          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 5.250e-19
Identity = 88/161 (54.66%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    1 FQGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGG--------GXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQA---EIRLYHAVHCM------------------QGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEI 132
            FQGKYEEAEPLY  S AI EKV GP+H +VA+ LNN  G         XXXXXXXXXXXXXXXXXXXXXXXXX          +SQA    + +     C+                  QG Y+EA+PLYER QAI++KVLGPDHP +AT LNNRAGLL+I
Sbjct:   86 FQGKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQALNKRVGVEGKCLCLFATSYRPHFVWLNYEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLKI 246          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.700e-18
Identity = 62/145 (42.76%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    2 QGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHC-----------MQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQVR 135
            QGKY+EA  L ERS AIREK LGP+HPDVAQSLNN                             L+  +R +         L++ +H             QG Y EA  LYER  AI+EK LGPDHP +A +LNN A LLE QVR
Sbjct:  355 QGKYDEAGKLCERSLAIREKALGPDHPDVAQSLNN-------------------------WALLLESQVRAIRIPGSF---LWYPIHSGVLNNRALLLKAQGNYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWALLLEAQVR 471          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 7.490e-17
Identity = 57/126 (45.24%), Postives = 68/126 (53.97%), Query Frame = 0
Query:    2 QGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRA 127
            QGKY EAEPL+ERSQAIREKVL PE+P+VA  L  R                             KM+L  L+  +             QGK  EAEPL+ER QAI+EKVLGP++P +AT L NRA
Sbjct: 1809 QGKYAEAEPLHERSQAIREKVLDPENPEVATVLKTRA-------------------------CSAKMYLPWLSVRTAC-----------QGKGEEAEPLHERSQAIREKVLGPENPEVATVLKNRA 1898          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.790e-16
Identity = 55/131 (41.98%), Postives = 65/131 (49.62%), Query Frame = 0
Query:    3 GKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQ 133
            GK  EA PL+ +S  IREK LGPEHPDVA+SLNN  G                                     SQA +   + V  +   + +AEPLYER  AI EKV GPDHP +AT LNN A L E+Q
Sbjct:   64 GKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAG----------------------------------VLRSQASV---NPVFEILRNFQDAEPLYERSLAIDEKVYGPDHPEVATDLNNWAALYEVQ 157          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.800e-15
Identity = 78/127 (61.42%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    3 GKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFLRNLTFDSQAEIRLYHAVH------------CMQGKYSEAEPLYERCQAIKEKVLGPDHP 117
            GKY +AEPL ERS AIREKVLGPEHPDVAQSLNNR G XXXXXXXXXXXXXXXXXXXXXXXXX                                     QGKY EAEPLY+R  AI EKV GPDHP
Sbjct:  404 GKYADAEPLCERSPAIREKVLGPEHPDVAQSLNNRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPVSKHDPVTLPTAFQGKYEEAEPLYKRSLAIDEKVYGPDHP 530          
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.500e-15
Identity = 83/153 (54.25%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    2 QGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGXXXXXXXXXXXXXXXXXXXXXXXXXLKMFL---------------RNLTFDSQAE---IRL------YHAVHCMQGKYSEAEPLYERCQAIKEKVLGPDHPSLATTLNNRAGLL 130
            QGK  EAE LY+RS AI EKV GP HP+VA+ LNN    XXXXXXXXXXXXXXXXXXXXXXXXX                    +N+      E   IRL      +H +H +QG Y +A  LY+R  AI+EKVLGPDHP++A +LNNRAGLL
Sbjct:   16 QGKLAEAESLYKRSLAIDEKVYGPHHPEVAKDLNNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQNVPPGGVVEHSFIRLPYSAHSFHPLHHIQGNYDQAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14827.2814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0C4_9PHAE2.160e-2651.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE4.020e-2553.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE1.720e-2462.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC1_9PHAE2.750e-2251.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5H9_9PHAE5.250e-1954.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D0_9PHAE4.700e-1842.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIH9_9PHAE7.490e-1745.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LI51_9PHAE2.790e-1641.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLW6_9PHAE5.800e-1561.42NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KWM2_9PHAE8.500e-1554.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 2..38
e-value: 1.0E-8
score: 35.4
coord: 83..152
e-value: 1.6E-14
score: 53.9
coord: 161..217
e-value: 2.8E-7
score: 30.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 40..65
e-value: 1.4E-4
score: 21.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 90..221
coord: 2..65
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 90..221
coord: 2..65
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..77
e-value: 1.4E-21
score: 78.8
coord: 78..223
e-value: 1.3E-41
score: 144.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..67
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 87..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14827contigE-siliculosus-1a_F_contig14827:16..971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14827.2814.1mRNA_E-siliculosus-1a_F_contig14827.2814.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14827 16..971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14827.2814.1 ID=prot_E-siliculosus-1a_F_contig14827.2814.1|Name=mRNA_E-siliculosus-1a_F_contig14827.2814.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=224bp
FQGKYEEAEPLYERSQAIREKVLGPEHPDVAQSLNNRGGGKYAEAEPLYA
RATEIWEKALGLEHPLKMFLRNLTFDSQAEIRLYHAVHCMQGKYSEAEPL
YERCQAIKEKVLGPDHPSLATTLNNRAGLLEIQVRFVEAEPLYGRATAIW
EKALRADHPTVATVLNNRAGLLSNCSSGKYDEADPLYTRVLQILAATVGE
EHPNYAKALNNRAGLLESQVRAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf