prot_E-siliculosus-1a_F_contig14759.2776.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14759.2776.1
Unique Nameprot_E-siliculosus-1a_F_contig14759.2776.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length102
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14759.2776.1 vs. uniprot
Match: A0A6H5KX62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX62_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.390e-39
Identity = 81/101 (80.20%), Postives = 87/101 (86.14%), Query Frame = 0 
Query:    1 MRTNNNGKNNSAGERSLNDSVADEFGLKHDREDDTFSYTSSAKTQFSVSVAGGGGSNGLGLVRDSSDESDDDDLGEASRAIANPIFGDTSRAVGRQPKYKR 101
            M+TN NGK+N A ERSLNDSV  +FGLK+DREDDTFSYTSSAKT FSV VA G GSNGL +VR SSDESDDDDLGE SRAIANPIFGD +RAVGRQPK KR
Sbjct:  476 MQTNTNGKSNRADERSLNDSVTVKFGLKNDREDDTFSYTSSAKTHFSVRVADGEGSNGLAIVRASSDESDDDDLGEVSRAIANPIFGDMTRAVGRQPKNKR 576
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14759.2776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX62_9PHAE1.390e-3980.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14759contigE-siliculosus-1a_F_contig14759:488..793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14759.2776.1mRNA_E-siliculosus-1a_F_contig14759.2776.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14759 319..807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14759.2776.1 ID=prot_E-siliculosus-1a_F_contig14759.2776.1|Name=mRNA_E-siliculosus-1a_F_contig14759.2776.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=102bp
MRTNNNGKNNSAGERSLNDSVADEFGLKHDREDDTFSYTSSAKTQFSVSV
AGGGGSNGLGLVRDSSDESDDDDLGEASRAIANPIFGDTSRAVGRQPKYK
R*
back to top