prot_E-siliculosus-1a_F_contig147.2756.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig147.2756.1
Unique Nameprot_E-siliculosus-1a_F_contig147.2756.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length94
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig147.2756.1 vs. uniprot
Match: D8LFU2_ECTSI (Sec23_helical domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFU2_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.290e-45
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0 
Query:    2 SWTEPSSAVGLSEVMSLEELLCPIGGNRELISANVRGLRGACRDGGAAATGRAGTRVTGLAVKLLLDLLLGASPGPAGAGATSPAGGGRDAKD 94
            SWTEPSSAVGLSEVMSLEELLCPIGGNRELISANVRGLRGACRDGGAAA GRAGTRVTGLAVKLLL+LLLGA+PGPAGAGATS AGGGRDA+D
Sbjct:  148 SWTEPSSAVGLSEVMSLEELLCPIGGNRELISANVRGLRGACRDGGAAAAGRAGTRVTGLAVKLLLNLLLGAAPGPAGAGATSTAGGGRDARD 240
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig147.2756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFU2_ECTSI1.290e-4594.62Sec23_helical domain-containing protein n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig147contigE-siliculosus-1a_F_contig147:76341..77642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig147.2756.1mRNA_E-siliculosus-1a_F_contig147.2756.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig147 76341..77642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig147.2756.1 ID=prot_E-siliculosus-1a_F_contig147.2756.1|Name=mRNA_E-siliculosus-1a_F_contig147.2756.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=94bp
GSWTEPSSAVGLSEVMSLEELLCPIGGNRELISANVRGLRGACRDGGAAA
TGRAGTRVTGLAVKLLLDLLLGASPGPAGAGATSPAGGGRDAKD
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