prot_E-siliculosus-1a_F_contig147.2747.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig147.2747.1
Unique Nameprot_E-siliculosus-1a_F_contig147.2747.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length235
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: D7FS75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS75_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 1.360e-140
Identity = 225/234 (96.15%), Postives = 231/234 (98.72%), Query Frame = 0
Query:    1 MKVAALALVATSTASAAQQQSCFVPSVGGGLRPSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKAEGKIDEVYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKEETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW 234
            MKVAALALVATSTASAAQQQSCFVPSVGGGLRPS++TTSS S+QMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKS+VNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMK+EGKIDEVY+E ENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKK EETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW
Sbjct:    1 MKVAALALVATSTASAAQQQSCFVPSVGGGLRPSSKTTSS-SMQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSKVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKSEGKIDEVYEEGENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKK-EETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW 232          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A835Z067_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z067_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.090e-35
Identity = 102/185 (55.14%), Postives = 119/185 (64.32%), Query Frame = 0
Query:   63 VDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKAEGKIDEVYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKEETAEAAPK---SAAKKGAK-----GKKPAPATE-----AKPKKTGWW 234
            +D  ++ QQE+L RR NK  M++YK +V   RA AD K  +W WQ      DPL  W+KM+AEGKI +VY+E EN+EGGIPIP ASFGVGG XXXXXXXXXXXXXDLRLPY DQGYVD D A +  +G  FG  KKK+  A A      SAAK  A       KKPAPA       A  KK GW+
Sbjct:   48 MDAAFRDQQEILARRRNKNKMEEYKKQVEANRAVADEKVTRWAWQRRSDGKDPLTDWQKMRAEGKIPDVYEEGENQEGGIPIPSASFGVGGXXXXXXXXXXXXXXDLRLPYVDQGYVD-DSADV--MGKFFGGGKKKKPAAPAPASKQASAAKPAAPTNKFGAKKPAPAVPPAAAPAPEKKKGWF 229          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7S2AW55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AW55_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.200e-27
Identity = 85/170 (50.00%), Postives = 103/170 (60.59%), Query Frame = 0
Query:   48 WDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKAEGKIDEVYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKEETAEAAPKSAAKKGAKG 217
            WDF    E+    ++ +     QQ +L RR NKG   +Y   V + RA++D +   WK+QT     DPLV WKK+K+EGKI ++   DE   GGIPIPMASFGVGG XXXXXXXXXX   DLRLPYADQGYVD D   M   G +FG  K K E  E   ++  KKG  G
Sbjct:   69 WDFF--GESPEKKAEKEAQLAEQQAILSRRRNKGKQQEYFENVEKNRAKSDEERKMWKFQTRTDGEDPLVEWKKLKSEGKIKKLK-RDEGPGGGIPIPMASFGVGGEXXXXXXXXXXERFDLRLPYADQGYVDEDADVM---GKLFGKRKAKAEVPEEDEEAKTKKGPFG 232          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7R9ZRA3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRA3_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.580e-27
Identity = 91/187 (48.66%), Postives = 119/187 (63.64%), Query Frame = 0
Query:   21 SCFVPSVGGGLRPSARTTSSSSVQMKLWDFGLNREAI-TGPSQVDENWKAQQEMLKRRNN-KGAMDKYKSRVNEKRAQADAKANK-WKWQTE--KSSFDPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKE 200
            S FVP V         T S S+ Q+++  F  N +A  +G   +DE W+AQQE+LKRRN  K   D Y +++ ++R +A  K N  W WQ++  K   DP+  WKK +  G+I ++ D+  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYA+QGYVD D   M   G +FG NKKK+
Sbjct:   23 SAFVPQV---------TPSHSTTQLRMGWFDNNFKAGGSGRDDLDEQWEAQQEILKRRNKPKAERDAYFAKIEDRREEASKKQNDMWAWQSKSYKKGEDPIDEWKKRRKSGQISDLNDQYGDPKKVGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYAEQGYVDDDADFM---GKLFGKNKKKQ 197          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7S2A710_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A710_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.180e-27
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query:   33 PSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGA-MDKYKSRVNEKRAQADAKANK-WKWQTEK--SSFDPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKK 199
            P  ++ +SS   +  +  G N++ +      DE W+AQQE+LKRR    A  +KY   + E+RA+A  K N  W WQT+K     DPL  WKK +A G+I ++ ++  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+G+ F   KKK
Sbjct:   83 PMCQSATSSPSALYFFGQGSNKDKL------DEEWEAQQEILKRRRAPAAEREKYFEAIEERRAEASKKQNDMWGWQTKKYAKGEDPLDEWKKRRATGEISDLDNQYGDPKKVGGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADVMAKLGNFFSGGKKK 249          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7S2K8B2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8B2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.750e-27
Identity = 93/201 (46.27%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    7 ALVATSTASAAQQQSCFVPSVGGGLRPSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGA-MDKYKSRVNEKRAQADA-KANKWKWQTE--KSSFDPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKEE 201
            AL+AT+ A +A Q   F PS           +++SS++M L+D  +     +G  + DE ++ QQE+L+RR    A  D Y + V ++R QA   + +KW WQT+  K   DP+  WKK +A G+I ++ D+  +E ++GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+ S+F   KK++E
Sbjct:   20 ALIATTIAFSASQGIAFAPSNNVRSNGLIAASTTSSLKMGLFDNWV--AGGSGKDRRDEEFEKQQEILRRRRAPQAERDAYFNTVEKRRQQASIDQQDKWAWQTKTYKKGEDPIDEWKKRRASGQISDLDDQYGEEEKKGGIPMPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDADFMGKLTSMFTGKKKEKE 218          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7S2SJC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJC5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.880e-26
Identity = 79/178 (44.38%), Postives = 112/178 (62.92%), Query Frame = 0
Query:   23 FVPSVGGGLRPSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAKANKWKWQTEKSSFDPLVAWKKMKAEGKIDEVYDEDENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKE 200
            FVP+  GGL   A+     +++ +   FG   E      + +E  +AQ+E+L RR +K  +D+Y   V  +R Q+D     W +QT+ +  DPL+ WK+++ EGKI ++  + E +EGGIPIP+ SFGVGGSXXXXXXXXX    DLRLPYA+QGYVD D   M K+G +F + + KE
Sbjct:   50 FVPAPAGGLLQ-AKGARGQAIRREWGIFGDKSEEKK--REEEEAMQAQREILARRKSKSKVDEYFKDVETRRRQSDEDRKIWSFQTD-TKQDPLIKWKQLRQEGKIKDL--KREGQEGGIPIPLPSFGVGGSXXXXXXXXXGERFDLRLPYAEQGYVDEDADVMGKLGRMFSFGRGKE 221          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: B7FWS1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWS1_PHATC)

HSP 1 Score: 108 bits (271), Expect = 1.310e-25
Identity = 87/177 (49.15%), Postives = 110/177 (62.15%), Query Frame = 0
Query:   29 GGLRPSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEML-KRRNNKGAMDKYKSRVNEKRAQADAKA-NKWKWQTEKSSF--DPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKK 199
            G     A    S+++ M L+D    R   +G   +DE W+ QQE+L +RR  K   DKY  +V ++R QA AK  + W WQT+  S   DP+  WKK +A+G I ++ ++  D  + GGIPIP ASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M KI + FG   KK
Sbjct:   18 GAFVTPANAAKSTALPMGLFDDW--RAGGSGKDSLDEEWEKQQEILAERRKPKAERDKYFEKVEQRRQQASAKQKDMWAWQTKSYSKGEDPIDEWKKRRADGTISDLENQYGDPKKIGGIPIPGASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDDDADVMGKISAFFGGGTKK 192          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A1E7EU29_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU29_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.520e-25
Identity = 83/171 (48.54%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   34 SARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADA-KANKWKWQTE--KSSFDPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKK 199
            S RT  S  +QM ++D         G    DE  K Q+ + +RR  K   DKY  +V ++R  AD  +++ W WQT+  K   DP+  WKK +A+G I ++ D+  D  + GGIP+PMASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+   FG N KK
Sbjct:    3 STRTQHSMELQMGMFDNWRAGGTAGGDELNDEYAKQQRILEERRAPKSQRDKYFQKVEQRRQTADKERSDNWAWQTKTYKKGEDPIDEWKKRRADGTIGDLEDQYGDPKKIGGIPLPMASFGVGGEXXXXXXXXXXXXXXLRLPYADQGYVDEDSDVMGKLSGFFGGNNKK 173          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Match: A0A7S3P2V2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2V2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.060e-25
Identity = 99/239 (41.42%), Postives = 127/239 (53.14%), Query Frame = 0
Query:    1 MKVAALALVATSTASAAQQQSCFVPSVGGGLRPSARTTSSSSVQMKLWDFGLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAKANK-WKWQTEK--SSFDPLVAWKKMKAEGKIDEVYDE--DENEEGGIPIPMASFGVGGSXXXXXXXXXXXXXDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKEETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW 234
            MK+AA  L+A + ASA    S F+P+     RP    T+   +    W  G           +DE W+ QQE+L  R +      Y  +V E R +A  K ++ W WQT+K     DP+  W+K +A+G I ++ ++  D  + GGIPIP ASFGVGG XXXXXXXXXXXXX LRLPYADQGYVD D   M K+ S FG  KKKE                  +P P  +  PKK G W
Sbjct:   14 MKIAAGILLAGTIASA----SAFMPTA----RPQTTETALQGL-FDSWRAG----GTASQDDLDEQWQRQQEILANRRDPTKTKAYFDKVEENRKEASRKQSEMWSWQTKKYGKGEDPIDEWRKRRADGSISDLENQYGDPKKIGGIPIPGASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDEDSDVMGKLASFFGGGKKKEP-----------------EPEPVKDEPPKKKGGW 222          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig147.2747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS75_ECTSI1.360e-14096.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z067_9STRA4.090e-3555.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2AW55_9STRA1.200e-2750.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9ZRA3_9STRA1.580e-2748.66Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2A710_9STRA4.180e-2749.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2K8B2_9STRA6.750e-2746.27Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2SJC5_9STRA2.880e-2644.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7FWS1_PHATC1.310e-2549.15Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1E7EU29_9STRA2.520e-2548.54Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3P2V2_9STRA3.060e-2541.42Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.591

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig147contigE-siliculosus-1a_F_contig147:9291..14606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig147.2747.1mRNA_E-siliculosus-1a_F_contig147.2747.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig147 9198..15804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig147.2747.1 ID=prot_E-siliculosus-1a_F_contig147.2747.1|Name=mRNA_E-siliculosus-1a_F_contig147.2747.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=235bp
MKVAALALVATSTASAAQQQSCFVPSVGGGLRPSARTTSSSSVQMKLWDF
GLNREAITGPSQVDENWKAQQEMLKRRNNKGAMDKYKSRVNEKRAQADAK
ANKWKWQTEKSSFDPLVAWKKMKAEGKIDEVYDEDENEEGGIPIPMASFG
VGGSFGVGGKWDEGGRFDLRLPYADQGYVDPDEAPMKKIGSVFGWNKKKE
ETAEAAPKSAAKKGAKGKKPAPATEAKPKKTGWW*
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