prot_E-siliculosus-1a_F_contig1467.2739.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1467.2739.1
Unique Nameprot_E-siliculosus-1a_F_contig1467.2739.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length162
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Match: D8LI44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI44_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 3.810e-112
Identity = 155/160 (96.88%), Postives = 159/160 (99.38%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEELRTEFEKFAEKRLARELPDFYQGECLLII 160
            MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRP+ESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLE+LRTEFEKFAE+RLA+ELPDFYQG CLLII
Sbjct:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPVESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEDLRTEFEKFAEQRLAKELPDFYQGGCLLII 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.260e-81
Identity = 148/254 (58.27%), Postives = 152/254 (59.84%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFF-------------------------------------------------------------------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRLARELPDFYQGECL 157
            MWRPWAQVALLT+PWCFPAVVYT DEDLAPFNETRNWCESYRP++SFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHN F                                                                                                 MKSSFRDQLSLEELRTEF KFAE+RLARELPDFYQ  CL
Sbjct:  430 MWRPWAQVALLTLPWCFPAVVYTTDEDLAPFNETRNWCESYRPVQSFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNLFDSLVLFWPPIAEPMYRYLTGDEEYLHSYTHGFSTLPTPAQVQDSIPEHVVLDTELRQNILQPVTGCIAFVVFPSLHSCAVTAAIAHFPSSCFPFVSQMKSSFRDQLSLEELRTEFGKFAEERLARELPDFYQA-CL 682          
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.940e-72
Identity = 120/197 (60.91%), Postives = 134/197 (68.02%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRLARELPDFYQGECL 157
            MW PWAQV LLTVPWC PAV YT D+ L+ FNE RNWCE YRPI++FTY+L   LIA AFVLVYQMRKVRKQMNEY LQVFQL FLL+TG+VVFPLQH +LD++H IRRIWVLYHNF                                         MK S RDQLSL+ELRTEF+KFAE R+ARELP+FYQ  CL
Sbjct:   67 MWPPWAQVLLLTVPWCIPAVAYTIDDHLSRFNEVRNWCEIYRPIDTFTYILGSSLIASAFVLVYQMRKVRKQMNEYRLQVFQLAFLLLTGSVVFPLQHLLLDNKHGIRRIWVLYHNFLDSLVLFWPPIAEPMYRYLTGDVDYLNSYTQGFSTLPTPAQMKGSLRDQLSLDELRTEFQKFAENRMARELPEFYQA-CL 262          
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.440e-40
Identity = 87/197 (44.16%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRLARELPDFYQGECL 157
            MW  WAQVALL++PW  P V Y+    L+ FNE  NWC+    I++  YV  G+ I GAF L +QMR+VRKQMN Y +QV QL FL VTGT++FPL    L     IRR W++Y N                                          M+S  +DQLSLEELR EFEKFA+ ++ARELPDFY+  CL
Sbjct:   97 MWPAWAQVALLSIPWLVPVVAYSIKPSLSEFNELGNWCDINVAIDTALYVYGGVPIIGAFFLSFQMRRVRKQMNFYRMQVLQLLFLFVTGTIIFPLLEESLHSN--IRRTWIMYDNIVSSIILFWPPIIEPLYRKLSGDEDYLYSYTKGFSQLPTPAQMRSCLKDQLSLEELRCEFEKFADSKVARELPDFYKA-CL 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 4.940e-7
Identity = 53/179 (29.61%), Postives = 79/179 (44.13%), Query Frame = 0
Query:    7 QVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYVLDG----LLIAGAFVLVYQMRKVRKQMNEYHLQVFQL---TFLLVTGTVVFPLQHAILDHRH-EIRRIWVLYHNFFMK-------------------------SSFRDQLSLEELRTEFEKFAEKRLARELPDFY 152
            QV LL+     P ++   D DL  F+ET N C +          +D     +++    V   Q+R VRKQ NEY    + L   T LL +  +V  +   ILD  H  +RR+ + +  F MK                         ++   QLS+E+LR EF ++ E ++A EL DFY
Sbjct:  103 QVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAI---ILDGHHCYVRRVAIAWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFY 278          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1467.2739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LI44_ECTSI3.810e-11296.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1F7_9PHAE1.260e-8158.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B4_ECTSI1.940e-7260.91RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G7J3_ECTSI2.440e-4044.16RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ5_ECTSI4.940e-729.61Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..23
score: 0.625
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1467contigE-siliculosus-1a_F_contig1467:8942..13085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1467.2739.1mRNA_E-siliculosus-1a_F_contig1467.2739.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1467 8942..13149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1467.2739.1 ID=prot_E-siliculosus-1a_F_contig1467.2739.1|Name=mRNA_E-siliculosus-1a_F_contig1467.2739.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=162bp
MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPIESFTYV
LDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAI
LDHRHEIRRIWVLYHNFFMKSSFRDQLSLEELRTEFEKFAEKRLARELPD
FYQGECLLIIH*
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